Gene Daro_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2330 
Symbol 
ID3566185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2509645 
End bp2511093 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content60% 
IMG OID637680796 
Producthypothetical protein 
Protein accessionYP_285536 
Protein GI71907949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.309266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.603945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATT ACGACCATCC TCATTTGCGG CGCAGCGCTG CCGCCTTCCT GGCGCTGCTG 
CTGGCGATCC CGTCCTTCCA ACTGCAGGCG GGCGACCTCA ATAGCGAGGT GAACAACATG
TTCAACAATC TAGGCTCCAT TGGCAACTAC ACCGCCCCCG GTGCCTTCCG TGGCCAGACC
TTCAATACCT ACACCGGCGG CAACTTGATG ATGCGCTCGC CGAACAAGGT TTATCAGTTG
GCTGCCATCC AATTCCCCAG CGCCAAAGCC GGCTGCGGCG GCATCGACGT CTTTGGCGGC
TCCTTCTCGC ACATTTCGGC AACCGAGTTC AAGAACATGC TGAAGAACAT CACGGCTGCC
CTGCCGGGAA TCGCTTTCCA ACTCGCACTG GAAGCGGTCT CGCCGCTGCT CGGCGGACTG
ACCAAATGGG CCAAGGGACT GGAGACCTGG ATCAACAATG CCCGGATCAA TTCCTGCGAG
ACCGCCAAGG CCATAGTCAG CACGGCAGCC GAATCGATTG GCTACAGTTC GCAGGAAACC
TGTGCCGATC TGGCCATCGA GATGGGCATG GAAAGCGATC GTGATGCAGC GCGTCGGCGC
TGTGCGACGG ATCGGCCGAG CATTCTGTCG TCAGCACGCT CCTCGGCCGA CCCGAAGGTG
AAAAACAAGG CGCCCTTCGT CGGCAACCTA ACCTGGAAAG CCTTGCAGTA CACCGGTGCC
TATCTCGACG ATCAGGAGCG CGAACTGATC ATGAGCCTGG TTGGCACCAT TATCTATTAC
CCGGAAGAGT CGGCCCGCGA CCCCGAGCCG ATCGCCCCGA CGCTGACCTC GATCAGCCAG
TTGCTCTACG GACAGGGTGC GGCCGCCGGT ACGGATGTCG TGCAGCATGT CTTGAAGTGC
AACGACTACA GCAATTGCGA CGTCGTCACC TTGAACACCA CGTACACCCA CACGCCCTTT
ACCGCCAAGG TCGAGGCGAT CATGCGCTCC ATTGCCGAAA AGATCACCAC GCGCACCGCC
ATCCCCAATA ACTCGACCGA GGTCGGCTTC GTGAATCAGA CCACCGAGCC GGTTTACAAG
ATGTTGTCCA TCGGCACCAG CATTCCGGGA TCGGGCTTGG CCGACAGCCT GATCGCCCAG
TACCGCGATG TGATTGCCGC CGACTACGCC TATGTTTTCC TTGAACGCAA TCTGCGGCTC
GGCATGGCCG CGCTGGACAA GAACTACACC CTGCAGCAGT CGCAACGCGA GCAGGCCAAC
CAGGTCCGTC AGCGGGCACA AGCCATGCTC ACGCAACTCT CCCAGGAAAA GAACCTGCTC
TACCAGAAGG TCGGCTCCTT CCGGGCAGTA TCGAACCACC TGGAGCAACT CGAACGCCAA
CTACGTTCCA GCATGCCGCA ACACGTGATG GACATGCTCG GCCAGCAGGC CGCCTATCTG
TCGCAATAG
 
Protein sequence
MKHYDHPHLR RSAAAFLALL LAIPSFQLQA GDLNSEVNNM FNNLGSIGNY TAPGAFRGQT 
FNTYTGGNLM MRSPNKVYQL AAIQFPSAKA GCGGIDVFGG SFSHISATEF KNMLKNITAA
LPGIAFQLAL EAVSPLLGGL TKWAKGLETW INNARINSCE TAKAIVSTAA ESIGYSSQET
CADLAIEMGM ESDRDAARRR CATDRPSILS SARSSADPKV KNKAPFVGNL TWKALQYTGA
YLDDQERELI MSLVGTIIYY PEESARDPEP IAPTLTSISQ LLYGQGAAAG TDVVQHVLKC
NDYSNCDVVT LNTTYTHTPF TAKVEAIMRS IAEKITTRTA IPNNSTEVGF VNQTTEPVYK
MLSIGTSIPG SGLADSLIAQ YRDVIAADYA YVFLERNLRL GMAALDKNYT LQQSQREQAN
QVRQRAQAML TQLSQEKNLL YQKVGSFRAV SNHLEQLERQ LRSSMPQHVM DMLGQQAAYL
SQ