Gene Daro_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2329 
Symbol 
ID3566184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2508785 
End bp2509648 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID637680795 
Producthypothetical protein 
Protein accessionYP_285535 
Protein GI71907948 
COG category 
COG ID 
TIGRFAM ID[TIGR02740] TraF-like protein 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value0.370082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.787309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC GTAACCGCCC CGCCCTCCCG CTGCTGCTGA CCTTTGTTGT GATGTTCGGT 
AGCGATAGCG CAACAGCCCA GGATGCGACT TCCCGCTACT GGGCCGACAG TTGGCGCGGC
TGGCATTTCT ATGAAATGCC AGCACCCGAG GAACACGAAC TTCCATTGCC ACCGGGCAAG
ACCTCAGCAA CTGCGCCACC GACTCTACCG CCGCGCGCAC CGGAACTGGT CGAATTCGAA
CGCCTCCAGA AAACCCTTGA AGAGACGCGC AATATCGCCA TCATGCGACC GAGCGAAGCC
AATGTCCGGC GCTACATGGA ACTGGAGTCC CAGGTCGTCG CCCGCGCTTC CTATTTCGCC
GACGTCGCGC AGCGCGTGGC CTGGGCTACA CCGCAACTGG ACCCAACCCT GCAGGGCCGC
CCAGTCAATG CCAAGGCCCT GGAAGTCTTC GACCAGGCCG AACTGGTCGA TCGTTCGCGC
GCCATTGCCG ACCTGGGCAA GGATCACGTG TTGTTCTTCT TTTATCGCTC GGATTGTCCG
TACTGCCATG CCTTCGCACC GACCTTGGCA GCCTTCCAGG CCCGTCACGG CATCCAAGTC
GTCGCCATCA GCGTGGACGG TGGTCCGCTG CCGAGTTTCC CCAATGCCCG CCCGGACAAC
GGCATTGCCA CCACCCTGAA GGTCAGCCAG GTACCCGCCG TTTTTCTGGC TCAACCCTTC
ACCGGAAAGA TATCCCCCAT CGGCTTCGGT GTGCTCTCGG AATCCCAGTT ACTCGAACGC
ATTGCCACGG TGTCCGCTCC GCAAGCCGAG GCCCTGCTGC CTACAACCAC GCAAGGTCTC
GCCCTACCCC CGGAGGTGCC ATGA
 
Protein sequence
MTIRNRPALP LLLTFVVMFG SDSATAQDAT SRYWADSWRG WHFYEMPAPE EHELPLPPGK 
TSATAPPTLP PRAPELVEFE RLQKTLEETR NIAIMRPSEA NVRRYMELES QVVARASYFA
DVAQRVAWAT PQLDPTLQGR PVNAKALEVF DQAELVDRSR AIADLGKDHV LFFFYRSDCP
YCHAFAPTLA AFQARHGIQV VAISVDGGPL PSFPNARPDN GIATTLKVSQ VPAVFLAQPF
TGKISPIGFG VLSESQLLER IATVSAPQAE ALLPTTTQGL ALPPEVP