Gene Daro_2326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2326 
Symbol 
ID3566181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2505532 
End bp2506290 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID637680792 
Producthypothetical protein 
Protein accessionYP_285532 
Protein GI71907945 
COG category 
COG ID 
TIGRFAM ID[TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.0830351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCTA CTAACCTCCA ACGAACCCTC GTCACCATGA TCCTCGGTCT CAGCGCCGCA 
CTCGTTGCCG GCAGTTCGGC CCAGGCCCAG ATTTCGCCGG TCGTCATAGA GGCGGACATC
GAACGCGCCC GGCGCGAGAC CCCCACCGTC ACCGAGCAAG ATATCGAGTT GGCGCGGCAG
AAGTACGCCC TGCCGGGTGA TGCCGGACAA CGGCTCGCCC CGCTGAACAG CCCGAATATC
GAGGCGCTAC CCAAGCCGGC AACGCAGATA CCGGTCGATC TGGAAGCGCT GGCTCGCGGC
TATGCCGGGC AATCCGATGC GATGGCTCAG GCGCAGGGGC TCACTGCCGG GCCAGGACTT
TTCCTCTTCG TCAGCCTGAC CATGCCCCGC GCCACGCTGC AAGGTCTGGT CGACCAGGCG
GCACGGGCCA AGGCCACCAT CGTCATCCGC GGCTTTGCCA ACGGTTCGCT GCGCGACACG
GTTGCCCTGG TCCAGGGCTT GATCGGCAAA CGGCAGGTAG CAATCCAGAT CGATCCGCTG
GCCTTCGACC GGTTCGCCAT CAGCAAGGTA CCCAGCTTTG TCCTGGTGCG TGACGGTACA
CGTCCCGTCG TCTGCGCCAG CGGCAGTTGC GCCTCCGCCG ACAGTTTCCT GCGATCAACT
GGTGACGTCA GCCTGGATTA CGCGCTGGAA CACATGCAGC GCTCGGCGCC TGCCTTTGCT
CCAGCCGCCG AACTCTTCCT GAAACGCATC AGAGGATAG
 
Protein sequence
MSATNLQRTL VTMILGLSAA LVAGSSAQAQ ISPVVIEADI ERARRETPTV TEQDIELARQ 
KYALPGDAGQ RLAPLNSPNI EALPKPATQI PVDLEALARG YAGQSDAMAQ AQGLTAGPGL
FLFVSLTMPR ATLQGLVDQA ARAKATIVIR GFANGSLRDT VALVQGLIGK RQVAIQIDPL
AFDRFAISKV PSFVLVRDGT RPVVCASGSC ASADSFLRST GDVSLDYALE HMQRSAPAFA
PAAELFLKRI RG