| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2317 |
|---|
| Symbol | |
|---|
| ID | 3566172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2497223 |
|---|
| End bp | 2498593 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637680783 |
|---|
| Product | TraB pilus assembly |
|---|
| Protein accession | YP_285523 |
|---|
| Protein GI | 71907936 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 0.653277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC CGCGTCAGTG GATGCAAACG CTGCGGGGCT TACCGCAGCA ATTACTGCAG
CACCTCTCCC CGCGGCAACG CCAGTACGCC ATGCTTGGCG CCCTGCTGGT CGGTGGCGTC
GGGCTGCTCT GGACGATTTT TGCATTCACG GCGAGCAGTC CGCCAGCGAT CAGCACGCAA
CCCGCCACCG GGCCAGCCAG TTCGGTCACC AACATCGGCG TGATGTCGCC TGGCGCTCAG
GTCAATCCGG TCGATCAGTG GGTCGGCACA GCCGGCCGCA AGCTTGCCCA GTACGAGAAC
GAACGCGAAG AACAGGGACG ACTCAACAAG GATCGCCAGA CCTTCGAAGC TAAGACGATG
CAACGCTTTG CCGAACTGGA ACAGCGACTG ACGTCGACCC AGCAGGCAGT TGCGACGCCC
ATGCCTCCCA CGCCAGTCCC GACCATGCCA CCGGCGGCGA GTCTGCCCCC TGCTCCGCCA
CCCTCCAAGG GCTTGTCCAC TGGGGCAATG CCGAGCGGCA CGCCCGGCGA CCTGCTGCCT
CCGAGCCCGC TGATTGCGCA AACGCCAGCG ATCACCCGGA TTACGGTGGC CGAGCGCTCC
CTGCTCGCCA GCCCGGGAGA GAAAGCCGAG CGCGCCGCCG GGGCTGGATC ACAAAACCCC
CGAACCGTAT CCACCTTCCT GCCCGTCAGC TTTACCCGTG GCACGCTGCT GGGGGGACTG
GATGCGCCGA CCGGTGGGCA ATCGCAATCC AATCCGCACC CGGTCCTGAT CCGTCTTTCA
GACAACTCCT TCCTGCCCAA CCGCTTCCGC GCCGAATACC GGGAGTGCTT CGTGGTAGCC
GCCGGCTATG GCGACATCAG TTCCGAGCGT GCCTATCTGC GGACCGAAAG TCTGTCTTGC
GTACGAACCG ACGGCGCGAC GCTGGAAGTC AAGATTCAGG GTTCGATCTA CGGCGAGGAT
GGCAAGGTCG GCATGCGCGG GCGACTGGTC ACCAAGCAGG GCCAAATGCT CGCCAACGCC
CTGCTAGCCG GTGTGGTCAG CGGCATCGGC CAGGGCCTGG CCACCTCGTC GACCGAGTAC
AGCACCTCAG CTCTCGGTAC AGTCGCCAGT GCCACCGGAT CCGAAGCCTA TCGCGCCGGC
CTCGGCTCGG GTGTCGGCAA GGCCCTCGAC CGGCTGGCCC AGTACTACAT CAAGCTCGCC
GAGAACACCT TTCCGGTCAT CGAAGTGGAC GCCGGTCGCG AAGTCGACGT GGTGATCACC
AAGGGCGTGC GCATCGATGT GCCGATGACA AGCGGCGAAC CGCCTTCCGC CCGCTTCGCC
AATTCCCCTG AAACCCGTTA TCTGGAGACC TCGGACGATG GCAACTACTA A
|
|---|
| Protein sequence | MTTPRQWMQT LRGLPQQLLQ HLSPRQRQYA MLGALLVGGV GLLWTIFAFT ASSPPAISTQ
PATGPASSVT NIGVMSPGAQ VNPVDQWVGT AGRKLAQYEN EREEQGRLNK DRQTFEAKTM
QRFAELEQRL TSTQQAVATP MPPTPVPTMP PAASLPPAPP PSKGLSTGAM PSGTPGDLLP
PSPLIAQTPA ITRITVAERS LLASPGEKAE RAAGAGSQNP RTVSTFLPVS FTRGTLLGGL
DAPTGGQSQS NPHPVLIRLS DNSFLPNRFR AEYRECFVVA AGYGDISSER AYLRTESLSC
VRTDGATLEV KIQGSIYGED GKVGMRGRLV TKQGQMLANA LLAGVVSGIG QGLATSSTEY
STSALGTVAS ATGSEAYRAG LGSGVGKALD RLAQYYIKLA ENTFPVIEVD AGREVDVVIT
KGVRIDVPMT SGEPPSARFA NSPETRYLET SDDGNY
|
|---|
| |