| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2293 |
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| Symbol | |
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| ID | 3566206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2476388 |
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| End bp | 2477197 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637680760 |
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| Product | GGDEF |
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| Protein accession | YP_285500 |
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| Protein GI | 71907913 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.00190961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCTA TGTTGCTCGC CGGCATATTA TTGCTCGCGA TTGCCACGCT CGATGTGCTT
ACGCGAGTTC AATTGCGCAT CCCCCAGTTC TACCTCATCC CCGTCGTATT GATTGCCTGG
CGCGTCGGGC TTCGCGCAAG CATCGCAACT GCCATCCTCG CCGCCATAAT CGTTTTTTTC
AGCAGTATCC AGGCCGGAAA CCACAACGCC CGCGCCTTTT TGTTTTATGC CGAACAACTC
GCGACACTCA CGTTTTTTAT CGCCGCCGGC GTGCTCGCGG CGCGCTTGCG AGAAATCCAA
GACCAGACGG CCGAGTTCGT TCGACGCGAT CAACTGACCG GAATCGCCAA TCGGATGGCG
CTCATGGAGC GGCTAAAACT CGAACTCGCC CGGCACCGGC GCACCTCACA ATCTTTTGCC
CTTGTGTTCA TCGATTGCGA CAACTTCAAA GAGATCAACG ATAGGCGCGG TCATCTGGAG
GGCGATCATT TCCTGCAAAT TGTCGCCGCT ACGCTTCAGG GGGCAATGCG AATGACTGAT
TTGGTGTCCC GCCTCTCCGG CGACGAATTC ATCGTCTTGT TGCCGGACAC TGACCCCTGC
GGGGCACAAT GCGTCGCCGA CACGCTGGAG GTGCGTTTGC GGGAAGAGAC TATCCGGACA
GGGTGGAGCA TGACTTTCAG TATCGGTGTT GCCGTGTTTC CCACTCCACC GGCAAACCCG
GATATTGCGA TCCAACACGC CGACAATCTC ATGTATATGG CAAAACAAGC CGGCAAGGGA
CGGTCGATCC TTGAAGTGTT CGAAGTATGA
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| Protein sequence | MRAMLLAGIL LLAIATLDVL TRVQLRIPQF YLIPVVLIAW RVGLRASIAT AILAAIIVFF
SSIQAGNHNA RAFLFYAEQL ATLTFFIAAG VLAARLREIQ DQTAEFVRRD QLTGIANRMA
LMERLKLELA RHRRTSQSFA LVFIDCDNFK EINDRRGHLE GDHFLQIVAA TLQGAMRMTD
LVSRLSGDEF IVLLPDTDPC GAQCVADTLE VRLREETIRT GWSMTFSIGV AVFPTPPANP
DIAIQHADNL MYMAKQAGKG RSILEVFEV
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