Gene Daro_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2285 
Symbol 
ID3566277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2468527 
End bp2469354 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID637680752 
Productintegrase catalytic subunit 
Protein accessionYP_285492 
Protein GI71907905 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA AGGCCCACGA TCTGCCTGTC GTCAGGCAAG TCCAGTTGCT TGAACTTTCC 
CGCTCTTCTG TCTATTACCA GCCGCAGCCC ATCCCCGAAG ACGATCTTCG GTTGATGCGT
CGAATCGATG AACTGCATCT GGAATACCCC TTTGCCGGGG CGCGGATGCT GCGTGACATG
CTCAAGTTGG AAGGCCATGG AATCGGCCGC AAGCATGTCG GTACGCTGAT GAAGAAGCTC
GATATTCAGG CCATCTACCG CAAGGCCAAC ACCAGCCGGC GCAACCAGGC GCACCGCATC
TATCCCTACC TGCTGCGCGA CCTCGCCATC GACCGTCCGA ATCAGGTCTG GGCCATGGAT
ACGACCTACA TCCCAATGCG CCGGGGCTTC GTCTATTTGA GCGCGGTGCT TGATTGGGCC
ACTCGCCGGG TGCTGGCTTG GCGCCTATCG AACAGTTTGA CCTCCGATCC TTGTGTGGAT
GCCCTGGAAG AAGCCATCAT GAAGTACGGC CGACCAGAAA TCATGAACAC CGACCAAGGC
AGCCAATTCA CCAGCTCCGC CTTCATTGGC TTGCTTCAGG AGAGCACCAT TCAGGTCAGC
ATGGATGGCA AGGGCTGCTG GCGGGACAAC GTCTTCGTTG AGCGCCTCTG GAAATCGGTC
AAGTATGAGG AGATTTACCT GCACGGCTAC GACACCGTTT CCGAGGTCCG GCAGGCGCTG
GCCCGCTATT TCGATTTCTA CAATCGCCGT CGCCCGCACT CAACGCTTGA CGGGCAAACC
CCGGATACGG CTTACTTCAA CCAGCCGCTG CTCGCCGCAG CGGCTTAA
 
Protein sequence
MIDKAHDLPV VRQVQLLELS RSSVYYQPQP IPEDDLRLMR RIDELHLEYP FAGARMLRDM 
LKLEGHGIGR KHVGTLMKKL DIQAIYRKAN TSRRNQAHRI YPYLLRDLAI DRPNQVWAMD
TTYIPMRRGF VYLSAVLDWA TRRVLAWRLS NSLTSDPCVD ALEEAIMKYG RPEIMNTDQG
SQFTSSAFIG LLQESTIQVS MDGKGCWRDN VFVERLWKSV KYEEIYLHGY DTVSEVRQAL
ARYFDFYNRR RPHSTLDGQT PDTAYFNQPL LAAAA