Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2285 |
Symbol | |
ID | 3566277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2468527 |
End bp | 2469354 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637680752 |
Product | integrase catalytic subunit |
Protein accession | YP_285492 |
Protein GI | 71907905 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA AGGCCCACGA TCTGCCTGTC GTCAGGCAAG TCCAGTTGCT TGAACTTTCC CGCTCTTCTG TCTATTACCA GCCGCAGCCC ATCCCCGAAG ACGATCTTCG GTTGATGCGT CGAATCGATG AACTGCATCT GGAATACCCC TTTGCCGGGG CGCGGATGCT GCGTGACATG CTCAAGTTGG AAGGCCATGG AATCGGCCGC AAGCATGTCG GTACGCTGAT GAAGAAGCTC GATATTCAGG CCATCTACCG CAAGGCCAAC ACCAGCCGGC GCAACCAGGC GCACCGCATC TATCCCTACC TGCTGCGCGA CCTCGCCATC GACCGTCCGA ATCAGGTCTG GGCCATGGAT ACGACCTACA TCCCAATGCG CCGGGGCTTC GTCTATTTGA GCGCGGTGCT TGATTGGGCC ACTCGCCGGG TGCTGGCTTG GCGCCTATCG AACAGTTTGA CCTCCGATCC TTGTGTGGAT GCCCTGGAAG AAGCCATCAT GAAGTACGGC CGACCAGAAA TCATGAACAC CGACCAAGGC AGCCAATTCA CCAGCTCCGC CTTCATTGGC TTGCTTCAGG AGAGCACCAT TCAGGTCAGC ATGGATGGCA AGGGCTGCTG GCGGGACAAC GTCTTCGTTG AGCGCCTCTG GAAATCGGTC AAGTATGAGG AGATTTACCT GCACGGCTAC GACACCGTTT CCGAGGTCCG GCAGGCGCTG GCCCGCTATT TCGATTTCTA CAATCGCCGT CGCCCGCACT CAACGCTTGA CGGGCAAACC CCGGATACGG CTTACTTCAA CCAGCCGCTG CTCGCCGCAG CGGCTTAA
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Protein sequence | MIDKAHDLPV VRQVQLLELS RSSVYYQPQP IPEDDLRLMR RIDELHLEYP FAGARMLRDM LKLEGHGIGR KHVGTLMKKL DIQAIYRKAN TSRRNQAHRI YPYLLRDLAI DRPNQVWAMD TTYIPMRRGF VYLSAVLDWA TRRVLAWRLS NSLTSDPCVD ALEEAIMKYG RPEIMNTDQG SQFTSSAFIG LLQESTIQVS MDGKGCWRDN VFVERLWKSV KYEEIYLHGY DTVSEVRQAL ARYFDFYNRR RPHSTLDGQT PDTAYFNQPL LAAAA
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