| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2274 |
|---|
| Symbol | |
|---|
| ID | 3566266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2461272 |
|---|
| End bp | 2462600 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637680741 |
|---|
| Product | metal-dependent phosphohydrolase |
|---|
| Protein accession | YP_285481 |
|---|
| Protein GI | 71907894 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.293482 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGC CAAGCGCACC GCACCAACTG AACCGAATGC TCGCCATTCG GCTGTGCGTT
GCGGCGCTCG TCATCGGCGC GGCAGCCGGC ATCGTGGCGT ATCAGGTTGA AACGCGGCGT
GTCGAATCCA TTGTCCTCGA ACTAGCAGCT GGTGGGGCAC GCCACCTGGA GTCACCGGCC
ATGCAGGTCC TATCCCGGGG AGAGTCCCCG GAAAACCACA GCGCCTTGAC TGCCCTGTTG
GACAAGAACA ACTTTGTTGG CATACGGGTT TTCGACGTCA AAAAAGAACT TGTCTACGAA
ACGTGGACAA CCCTGCCGCC TGGCGTTGCC GACGGACTCC GGTTGCGCCG GCACGACTGG
CCGGCTCTGG GCAGGGATCA TCGCAATAGA ATCCACATCG GCAACGAGCA CCTGATTCAG
GTGATCATTC CCTTAGCCAA AGAGTCCGGC GGCCTGGATG GCTATCTGGA AGGAACGTAC
CGCATCGATG AGGGAACGCT CGCCAACCAG AAACAGCAGA TCCTGGATGG CGTCCTTACG
GCAGTTGTCG CGGTATTTTC CACGGCCTTG CTGCTGTACC CCCTCCTACT CGGTCTCCTT
CGGCATGCAA CAAGATTGTC TCGGCGCCTG CTTGACTCCA ACCTGTCCAT TATCCGGTCC
CTCGGCAATG CAGTCGCCAA GCGCGACTCT GACACCGACG CACACAACTA CCGCGTCACT
CTCTACGCCG TGGCGCTCGC TGAGAAACTG CACTGGCCAA AAGGTGAGAT TGCCCACCTG
ATTGCCGGCG CCTTCCTTCA CGACGTGGGC AAGATCGGCA TCCCTGACCA CATACTGCTC
AAACCGGGAA AGTTGACCGA CGAGGAGTTC GAGATCATGA AAACCCATGC ACTTCTCGGC
CTCGACATCG TCGCCGGCAA TGCGTGGATG AACGCCACCC CGGTCATTCG CAATCACCAT
GAACGCTTCG ATGGCTCTGG CTATCCGGAT GGGCTGTGTG GGATGGAGAT TCCACCTGGG
GCAAGGCTGT TCGCCGTCGT GGATGTGTTC GACGCCCTCG TCTCGGCACG CCCCTACAAA
GCCCCGATAC CTTTCGAAAA GGCCCTGGCG CTGATCGAGA ATGAGTCGGG CCGGCATTTC
GATCCGGAGA TCGTTATTGC TTTCAGCGGC ATCATCGGTC GCCTTCACCA GGAGGTCGCT
ATGGTCAGCG AAGTTGAACT ACACGCCCAA CTGCGTTCGG CCATTTTTCG CTATTTCAAT
ACGGATGCGG AGGCTGACGG CACAGGGGCA TCGTTCGTTT CTGCCATCGC TGAAGGAGCA
CCATCATGA
|
|---|
| Protein sequence | MSLPSAPHQL NRMLAIRLCV AALVIGAAAG IVAYQVETRR VESIVLELAA GGARHLESPA
MQVLSRGESP ENHSALTALL DKNNFVGIRV FDVKKELVYE TWTTLPPGVA DGLRLRRHDW
PALGRDHRNR IHIGNEHLIQ VIIPLAKESG GLDGYLEGTY RIDEGTLANQ KQQILDGVLT
AVVAVFSTAL LLYPLLLGLL RHATRLSRRL LDSNLSIIRS LGNAVAKRDS DTDAHNYRVT
LYAVALAEKL HWPKGEIAHL IAGAFLHDVG KIGIPDHILL KPGKLTDEEF EIMKTHALLG
LDIVAGNAWM NATPVIRNHH ERFDGSGYPD GLCGMEIPPG ARLFAVVDVF DALVSARPYK
APIPFEKALA LIENESGRHF DPEIVIAFSG IIGRLHQEVA MVSEVELHAQ LRSAIFRYFN
TDAEADGTGA SFVSAIAEGA PS
|
|---|
| |