| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2267 |
|---|
| Symbol | |
|---|
| ID | 3566357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2455750 |
|---|
| End bp | 2458068 |
|---|
| Gene Length | 2319 bp |
|---|
| Protein Length | 772 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637680734 |
|---|
| Product | ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_285474 |
|---|
| Protein GI | 71907887 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.270801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.567344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAG TCGTCATGAA CCACGAACAT TCTTCCCGGA GCGATACGCC AGACATGGTT
GATCGAGATC CGGTATGCGG CATGACCGTC AAACCGGAAT CCCCCCACGC GACTGACCTG
GGCGGTATCC ACTACCGTTT TTGCAGCGCC AAATGCAAAA CGAAGTTTGA TGCGGAACCG
GCGCGTTACC TTGCCCCGAA GCAGGAGGAG AGTACCGTCC CCGGCGCCGA ATACACCTGC
CCGATGCACC CCGAGATTCG GCAGATCGGC CCCGGCACCT GTCCCAAGTG CGGCATGGCC
CTTGAACCGA TATTGCCCGA TTTTGAAAAG GACGATGACA ATACCGAGTA TCTGGATTTT
CGCCGACGCT TCTGGTTCAG TCTGCCGCTG ACCATCGTGG TTTTTGTTTT AGCTATGGCC
GGGCATCTGC TTGAAGTGTT GTCGCCACTC ATTCGGACCT GGGCCGAACT GTTGTTCAGT
CTCCCGGTCG TGCTTTGGGC CGGAGCGCCT TTCTTCGTTC GCGGTTGGCA GTCCATCATC
CAGCGCAGCC CAAACATGTG GACCCTGATC AGCCTCGGGA CAGGCGCGGC ATTCGCTTAC
AGCATGGTGG CAGCGCTGGC GCCTGGCCTG TTTCCCGTTT CATTCGTCGC CCACGGCCGC
ATCGGGGTCT ATTTCGAGGC CGCGGCCGTC ATCATTTCCC TGACCCTTCT TGGGCAGATG
CTCGAACTAA GAGCGCGCTC GCAGACCTCG GCTGCCATCA AGTCGCTGCT CGGTCTCGCC
CCGAAGACTG CCCGCCGTAT CAACCCCGAC AAAACCGAAG AAGATGTTCC TCTGTCGAAC
GTACATGTCG GCGATACCCT GCGTGTTCGG CCGGGCGAGA AGGTGCCGGT GGACGGCGAG
GTACTGGAAG GCTCCAGCGC CATTGACGAA GCGATGCTGA CCGGCGAACC GCTGCCGGTG
ACGAAACGCC CTGGCGACAA GGTAATCGGC GCCACCATGA ACACCTCCGG CAGTCTGGTG
ATCCGCTCCG AAAAGGTGGG TTCCCAGACC ATGCTCGCCC AGATCGTCCA GATGGTCGCC
CAAGCCCAGC GTTCCAAGGC GCCGATGCAG CGCCTGGCCG ATGTCGTGGC CGGCTATTTC
GTGATGGTGG TGTTCGCCAT CGCGCTGATC AGTTTCTTCG CATGGGGATT TTTCGGTGGT
GAGCAGGGTT GGGTTTTCGG CCTGATCAAT GGCGTCTCAG TGCTAATCAT CGCTTGCCCT
TGCGCCCTAG GGTTGGCTAC GCCGATGTCC ATCATGGTTG CCACCGGCAA GGCGGCGACG
CAGGGCATTC TGTTCCGGGA CGCGGCGGCC ATCGAGCGGC TGCGCGATGT CGATACGTTG
ATCGTGGACA AGACAGGCAC GCTGACCGAA GGGCACCCAT CCTTCGAGCG CGCCGTGGCG
GTGCCGGGCA CCGCGGAGGA CGAGGTACTT CGCCTTGCCG CCAGTCTCGA CCAGGGCAGC
GAGCATCCTT TGGCCGATGC CATCGTCCGC GCCGCACGGG AACGTGGGCT GGTCCTGGAA
AAAGCTGAAC AGTTCGAATC GGAGACCGGC ATCGGCGTGC GCGGGACGGT CGGCGGTAAG
CGACTGGCTC TTGGTAATGG TGCGCTGATG GCCCAGGATG GAGTTGATGT CGGCGCTCTC
GCCAAGGATG CCGAAAGCCT GCGGCAAAAT GGCGCCAGCG TCATGCACCT GGCGGCCGAC
GGCCACATTC TCGGCCTGCT GATCGTCTCC GACCCGATCA AGGCAAGCAC CCAGGAGGCG
CTGACAGTCC TGCGCCAGGC CGGGTTGCGT ATCGTGATGG CGACGGGTGA CGGCCTGACC
ACCGCCAAAG CCGTCGGTGC CAAGTTGGGC ATTGATGAAG TGTATGGCGA GGTCAAACCA
GCGGACAAAC TTGCGCTGGT GGAGCGTCTG CAGGGTGAGG GACGCGTCGT CGCCATGGCC
GGCGACGGCA TCAACGATGC CCCGGCACTG GCCAAGGCCG ACGTCGGTAT CGCCATGGGG
ACGGGCACCG ATGTCGCCAT GAACAGCGCC CAACTCACAC TGGTCAAGGG CGATCTGCGC
GGTATCGCCC GGGCACGCCT GCTGTCCGCC GCGACGGTCG GCAACATGCG CCAGAACCTG
GCCTTCGCCT TCATCTACAA CGCCCTCGGC GTGCCGATCG CCGCCGGCAT ACTTTATCCG
ACCTTCGGGC TGGTGCTGTC CCCCATGATT GCTGCCGCTG CCATGAGCCT GTCGTCTCTG
AGCGTAGTCG GTAATGCCTT GCGCCTGCGC GGTACTTAA
|
|---|
| Protein sequence | MPEVVMNHEH SSRSDTPDMV DRDPVCGMTV KPESPHATDL GGIHYRFCSA KCKTKFDAEP
ARYLAPKQEE STVPGAEYTC PMHPEIRQIG PGTCPKCGMA LEPILPDFEK DDDNTEYLDF
RRRFWFSLPL TIVVFVLAMA GHLLEVLSPL IRTWAELLFS LPVVLWAGAP FFVRGWQSII
QRSPNMWTLI SLGTGAAFAY SMVAALAPGL FPVSFVAHGR IGVYFEAAAV IISLTLLGQM
LELRARSQTS AAIKSLLGLA PKTARRINPD KTEEDVPLSN VHVGDTLRVR PGEKVPVDGE
VLEGSSAIDE AMLTGEPLPV TKRPGDKVIG ATMNTSGSLV IRSEKVGSQT MLAQIVQMVA
QAQRSKAPMQ RLADVVAGYF VMVVFAIALI SFFAWGFFGG EQGWVFGLIN GVSVLIIACP
CALGLATPMS IMVATGKAAT QGILFRDAAA IERLRDVDTL IVDKTGTLTE GHPSFERAVA
VPGTAEDEVL RLAASLDQGS EHPLADAIVR AARERGLVLE KAEQFESETG IGVRGTVGGK
RLALGNGALM AQDGVDVGAL AKDAESLRQN GASVMHLAAD GHILGLLIVS DPIKASTQEA
LTVLRQAGLR IVMATGDGLT TAKAVGAKLG IDEVYGEVKP ADKLALVERL QGEGRVVAMA
GDGINDAPAL AKADVGIAMG TGTDVAMNSA QLTLVKGDLR GIARARLLSA ATVGNMRQNL
AFAFIYNALG VPIAAGILYP TFGLVLSPMI AAAAMSLSSL SVVGNALRLR GT
|
|---|
| |