| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2264 |
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| Symbol | |
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| ID | 3566354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2450224 |
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| End bp | 2451864 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637680731 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_285471 |
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| Protein GI | 71907884 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAG CGAATCCCTC TGGGATGAAA CAGGGCGTGT TGGCAGTAGC AATCGTCGCG
ATTTTGGCTG GCGCTGGCGG CTACTGGGCC GGGCACAAAT CGACCGGCCA GACGGATGCC
ATGGCGCAGC CAGCAGCCAC CTCCGGAGCG CCGGCCAAAA AGGAGCGCAA ACTGCGTTTC
TACCGTAACC CGATGGGTTT GCCCGACACC TCCCCAGTCC CGAAGAAAGA CCCGATGGGC
ATGGACTACA TCCCGGTCTA CGAGGGTGAA GAGGACGAGG AACCCGGCGC TGCAAACCAG
ATCAGTATCA GCACAGAGAA AGTGCAAAAA CTTGGCGTCA AGACGGAGGC GGCCAGTCTG
CGGGCGCTGG ACAAGATTGT CCGCGCCGCC GGCCGCATTG AACCTGACGA GCGCCGCACC
TACACGATTG CTCCCAAGTT CGAAGGCTAT GTCGAGCGTT TGCTCGTCAA TGCAACCGGA
CAGCCGGTGG GCAAGGGGCA GCCATTGTTT GAGGTCTACA GCCCGGAACT GGTCTCGGCC
CAGCGTGAAT ATGCCATCGC AGCCGATGGC GTGCGGTCTC TCAACGCGGC CGGCGGCGAG
GCGCAGTCTG GCATGAAGCA ATTGGCTGAT TCGAGCCTGG CCCGTCTCAA GAACTGGGAT
ATATCCGAAG AGCAGGTCAA AGCCTTGGCT AAATCCGGTG AGACCAAACG CACGCTGACT
TTCCGCTCAC CGGTGAATGG CATCGTCACC GAGAAGAAAG CCATTCAGGG CATGCGCTTC
ATGCCGGGCG AAGCGCTCTA CCAGATCGCC GACCTGTCCG CCGTCTGGGT GGTCGCCGAA
GTTTTCGAGC AGGACATCGG ACTGGTGAAG TCCGGTGCCA AGGCCAAGGT CAAAATCAGC
GCCTATCCCG ATAAGACCTT CGAAGGTGCC GTCACCTACG TCTATCCGAC TTTGACGGCG
GCCACCCGAA CCGTGCCGGT TCGGGTCGAA CTCGCCAATC CTGGCGCCTT GCTCAAACCC
GGCATGTTTG CTCAGGTAGA ACTGCCGGTC TCGGCCAAGG GCTCTGTGGT CACCGTACCG
GTCTCCGCCG TTATCGACAG CGGCACCCGA CAGATCGTCC TCGTCCAGGC CAAGGAAGGA
CGTTATGAGC CGCGTGAAGT CAAACTCGGG GCGCGTAGCG ACAACTATGT GGAGGTGTTG
GACGGCGTAA AGAACGGCGA ACCCGTCGTG GTCGCCGCCA ATTTCCTGAT CGACGCCGAG
AGCAACCTGA AGGCGGCGGT CGGCGGTTTT GGACACGCAG CCCACGGTGG CAAAACGCCG
CCGACCGAAG GCGCCGCGAA ACCCGCTTCA GCAGGCGCGG GACATCATGC AGAGGGCAAG
GTCGAGGAAA TCGACACCAA GACAGGGGCG GTGAGCATCA GCCACGGCCC GGTGGACAGC
CTCAAATGGC CAGCCATGAC CATGGAGTTC AAGGCTGCCA ACGAGTCGCT ACTACAAACG
CTGAAGCCTG GCGCCAAGGT CGCCTTCGAG TTTGTCGAGC GTCAGCCTGG CGAATGGGTC
ATCACAGCGG CCACGCTGCT AGCGCCCAAC ACAGGGGCTA GCGCACCAGC CTCCGCTGCC
AGCCCTCACG CCGGTCACTG A
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| Protein sequence | MTGANPSGMK QGVLAVAIVA ILAGAGGYWA GHKSTGQTDA MAQPAATSGA PAKKERKLRF
YRNPMGLPDT SPVPKKDPMG MDYIPVYEGE EDEEPGAANQ ISISTEKVQK LGVKTEAASL
RALDKIVRAA GRIEPDERRT YTIAPKFEGY VERLLVNATG QPVGKGQPLF EVYSPELVSA
QREYAIAADG VRSLNAAGGE AQSGMKQLAD SSLARLKNWD ISEEQVKALA KSGETKRTLT
FRSPVNGIVT EKKAIQGMRF MPGEALYQIA DLSAVWVVAE VFEQDIGLVK SGAKAKVKIS
AYPDKTFEGA VTYVYPTLTA ATRTVPVRVE LANPGALLKP GMFAQVELPV SAKGSVVTVP
VSAVIDSGTR QIVLVQAKEG RYEPREVKLG ARSDNYVEVL DGVKNGEPVV VAANFLIDAE
SNLKAAVGGF GHAAHGGKTP PTEGAAKPAS AGAGHHAEGK VEEIDTKTGA VSISHGPVDS
LKWPAMTMEF KAANESLLQT LKPGAKVAFE FVERQPGEWV ITAATLLAPN TGASAPASAA
SPHAGH
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