| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2252 |
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| Symbol | |
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| ID | 3566439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2436038 |
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| End bp | 2439136 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637680719 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_285459 |
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| Protein GI | 71907872 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACA AGATCGTCGA TATCTCCCTG CGCTACAAGC TGCTGGTTCT GGTGGCTCTG
GCGCTGATCG TACTGCTCGG GGCACGAGGC TGGCAGCGCC TGCCGCTGGA TGCCTTCCCG
GACGTGACGC CGGTACAGGT CAATATCTAT ACCGAGTCGC CTGGTCTAGC GGCCGAGGAT
GTGGAAAAAC TGGTCACTTT CCCGGTCGAA TCGGTTCTCG CCGGCCTACC CAAGGTCGAG
GAAATCCGCT CCACCTCTTT GTTTGGCCTG TCCTTTGTCA GCGTCTATTT CAAGGACGAC
ATGGACATCT ACTTCGCCCG CCGCCTGGTG GGCGAGAAGC TGGTTGAATC CAAAACCCGC
ATTCCCGATG GGTATGGCGA ACCTGTCCTC GGGCCGAATG CCGCAGGGCT TGGGCAGGTG
TTCTGGTACA CCCTGGAAAC AATGGACGAC AAGCTCACCG GGATGGATCT GCGAACTGCC
CAGGACTGGG GCGTGCGCAT GATCCTGCGG ACGGCCCCCG GCGTAGATGA TGTGACCTCC
TGGGGCGGCG ACGAAAAGCA GTTTCAGGTG CTGATCGATC CGCGCCGCCT GATTAAGTAC
GGTCTCGGCT ACAAGGAGGT GATGACCGCC ATCGCCGCCA ACAACCGACA GGTCGGCGGG
CAGTACATCA ATCTTCAGCG CGAGCAATAC CTGGTACGTG GCCTGGGACT GGTCGCCAAT
GCGGAAGACA TCGGCGGCAT CCTCGTTACC CAGCGCGACG GCACACCGAT TTATGTGCGG
GACGTGGCCG ACATTCGTCC CGCCCCGGCG CTGCGTACCG GCGCAGTGAC CAAGGATGGC
AAGGAAGTCG TACTCGGCAT GGCCCTGGCC CGTACCGGCG AGAACGCCCA GCAGGTAGTC
GAAGCGGTCC GCGCCAAGGT CGCTACTGCG CTCAAGACCT TGCCTGACAA CGTGAAGCTG
GAAGTCGCCT ACGACCGCAC CGAATTGATT GGCAAGGCGA TCTCGATGGC CAGCAGCGCC
ATGCTGGAAG GTGCTGCACT GGTGGTGCTG GTGTTGTTCC TGTTTCTCGG CGAAGTGCGC
TCGGCGCTGA TTGTCGTCGT CGCCATTCCG GCCGCCTGGC TGGTCGCTTT CCTGTTGATG
GATCAGACCG GGGCCAGCGC CAACCTGATG TCCCTGGGTG GGTTGATCAT TGCGCTGGGC
ATGACCATCG ACGGGCCAGT GGTGCTCGTG GAAAACGCCT TCCGGCTACT GTCCCACCAT
GCCGGCAAAC CGGTCAACCG GACGGCCGTG GTGCTGGAGG CGGCTCGCGA GGTGATGAAT
CCGGTCGCCT TTGGCGTCAT CATCATCATT GTGGTCTTCC TGCCGCTCTT TGCGCTGACC
GGTATCGAAG GCAAGCTGTT CAAACCGCTG GCAATCAACA TGACCTTCGC CATGGTGGGT
TCGTTGATCC TGACCGTTAC CCTGATGCCG GTGCTCTGTG CCTTGGCGCT GCGCCCAAAG
AAGGAAGAAG ACCCACGACT GGTGCGCTGG CTCAAGCCGC GTTTTGAACC ACTGCTGCTG
TGGACGCTGG CGCATAAGAA GCGGGTGATG ATGACCACTG GCGCGTTGTT CATCGCGTCG
CTGGCGCTCT TCCCCTTCCT TGGCAAGGAG TTCATGCCCA CTCTGGAAGA GCAAGGCATC
ATGTTCCGGG TAACCAGCAT TCCCTCCACC TCGCTGGAAG AGTCCATTGC CGTTTCCGAG
CGCATTGAGG AGGCGTTAAA GACGTTTCCC CAGGTCAAGC ACTCGCTGGC CATGATCGGG
CGCGCTGAAA AAGGCGAGAC GGCGGACGTG AACTACATGG AAATCCTGGT CGATCTCCAG
CCGCACGATA CCTGGCCGGA GCGGATGACC TACCGCGAAC TTTCGGCCAA GATGCAAGAG
CGCCTGGAAA AGGAAATCCC CACGGCGGTA CTGGCAGCAA CCCAGCCCAT CCAGATGCGG
GTCGAAGAGC TTATTTCCGG AGTGCGAGCC ACGCTGGCTT TGAAGCTGTA CGGTGAAGAC
CTGGCAACGC TCGACCGCCT GGCAGCCGAA GCCAAGGAGA TTGTCGAAAA AGTGTCCGGT
GCCACCGACG TGGCGCTGGA AGCCAATCTC GGCAAGCCTC AGATGGTCAT CAAGGTGAAC
CGCCCTGAAG CGGCACGTTA CGGCATTAAC GCCGACGACG TACTCGACGT GGTGCAGGCC
GGCATCGGCG GCAAGGCGGT CAGCACTTTG ATTGACGGCG TACGCCGTTA CGATATCCAG
GTCTGGTTGC CGCCGGAGTT CCGCAACAGC ATCGAGGCGG TGAGCGCCAT CCCAATACGC
ACTGCCGGTG GTGCCCTGGT GCCCTTGTCA CGGGTCGCTA CGGTGGAATT GACTGAAGGC
TATTCCTTCG TGCGCCGCGA ACAATTGCAG CGTTATGCGG TACTGCAACT GGATGTGAAG
GGACGTGACG TGGATGGTTT CGTGCGCGAG GCCGAGGCAC GGCTCAAGAC GCAATTGAAG
CTGCCCGCCG GCTACTGGCA GGAATGGGGT GGGGCTTTCG AGAACCAGCA ACGAGCCATG
GCCAAGCTGG CGCTCATCGT GCCATTGACC ATTGGCCTCA TCTTCATCCT GCTCTACACC
GCGTTCAACT CAGTGCGCTA TGCTACGTTG ATCATCGCCA ACGTGCCTTT TGCCGCCATC
GGCGGCATCC TCTCTCTCTT CGTTAGCGGC CAGTATCTGT CGGTGCCGGC GGCGGTCGGG
TTCATCGCGG TCTTTGGTGT CGCCATGCTG AACGGCATCG TGCTGATCTC TTTCCTCAAT
GGTTTGCGCG AGCAGGGACT GAACATCCGG GAAACCGTGG TGCAGGGCGC GGTACTGCGC
TTGCGGCCGG TGCTGATGAC GGCGCTGGTC GAAATTCTGG GGCTACTCCC GTTCCTGCTG
GCGACAGGTG TCGGCTCGGA GGTACTACGC CCGCTGGCAA CAGTCGTGGT AGGGGGACTC
ATCTCTTCCA CCGCACTGAC GCTGTTTATC TTGCCGCTGG TCTATGAGTG GATGGAGCAA
CGCAGACAAT CACAAAATCT GGAAGGAGCA AGCCAATGA
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| Protein sequence | MLNKIVDISL RYKLLVLVAL ALIVLLGARG WQRLPLDAFP DVTPVQVNIY TESPGLAAED
VEKLVTFPVE SVLAGLPKVE EIRSTSLFGL SFVSVYFKDD MDIYFARRLV GEKLVESKTR
IPDGYGEPVL GPNAAGLGQV FWYTLETMDD KLTGMDLRTA QDWGVRMILR TAPGVDDVTS
WGGDEKQFQV LIDPRRLIKY GLGYKEVMTA IAANNRQVGG QYINLQREQY LVRGLGLVAN
AEDIGGILVT QRDGTPIYVR DVADIRPAPA LRTGAVTKDG KEVVLGMALA RTGENAQQVV
EAVRAKVATA LKTLPDNVKL EVAYDRTELI GKAISMASSA MLEGAALVVL VLFLFLGEVR
SALIVVVAIP AAWLVAFLLM DQTGASANLM SLGGLIIALG MTIDGPVVLV ENAFRLLSHH
AGKPVNRTAV VLEAAREVMN PVAFGVIIII VVFLPLFALT GIEGKLFKPL AINMTFAMVG
SLILTVTLMP VLCALALRPK KEEDPRLVRW LKPRFEPLLL WTLAHKKRVM MTTGALFIAS
LALFPFLGKE FMPTLEEQGI MFRVTSIPST SLEESIAVSE RIEEALKTFP QVKHSLAMIG
RAEKGETADV NYMEILVDLQ PHDTWPERMT YRELSAKMQE RLEKEIPTAV LAATQPIQMR
VEELISGVRA TLALKLYGED LATLDRLAAE AKEIVEKVSG ATDVALEANL GKPQMVIKVN
RPEAARYGIN ADDVLDVVQA GIGGKAVSTL IDGVRRYDIQ VWLPPEFRNS IEAVSAIPIR
TAGGALVPLS RVATVELTEG YSFVRREQLQ RYAVLQLDVK GRDVDGFVRE AEARLKTQLK
LPAGYWQEWG GAFENQQRAM AKLALIVPLT IGLIFILLYT AFNSVRYATL IIANVPFAAI
GGILSLFVSG QYLSVPAAVG FIAVFGVAML NGIVLISFLN GLREQGLNIR ETVVQGAVLR
LRPVLMTALV EILGLLPFLL ATGVGSEVLR PLATVVVGGL ISSTALTLFI LPLVYEWMEQ
RRQSQNLEGA SQ
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