Gene Daro_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2249 
Symbol 
ID3566436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2432242 
End bp2433294 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content58% 
IMG OID637680716 
Producthypothetical protein 
Protein accessionYP_285456 
Protein GI71907869 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.660047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.735627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC AGCATCCATT CATTTCACCC GGCATCGCAT CGGCACTGGG TGCTGCACTG 
CTCTTTGGGG CGGGAACGCC GTTGGCAAAA CTGTTGCTGC AAGACGTGAG CCCATGGCTA
TTGGCTGGAC TTTTTTATCT GGGCTCCGGG GCTGGACTTT CGCTTTATAG GCTTGTCAGC
AGGGCAGAAC CTGTCAGGCT GCCTGGCGCT GAAACGGGAT GGTTTGCCGG AGCCATCCTG
GCCGGTGGGG TGGTTGGCCC GGTCCTGTTG ATGTATGGCC TCTCGGGAAT GCCGGCTTCG
GGAACTGCAT TACTCTTGAA CGCCGAAGGT GTGTTGACCG CGCTGCTCGC CTGGCTCGTC
TTCAAGGAGA ATTTCGACTA TCGCATCGCC TTGGGCATGT TTGCCATTGC TGCTGGCGCA
GTAGTCCTCA GTTGGCCAGG AGAGATGCAA TTTGCCGGCG CATTGCCGGC GCTTGCAGTG
CTGGGGGCAT GTCTGGCATG GGCCGTCGAT AACAACCTGA CCCGGAAAGT CTCGCTGGCT
GATGCAACCT GGATTGCTGC CGTCAAGGGA TTGGTCGCAG GAACTGTGAA CCTGGCAATT
GCGTTCGCGC TGGGTGATCA GTTACCGAGT TTACCGATGC TGGCTGCCGC CTTGTTGGTT
GGTCTGCTGG CGTACGGCAT CAGCCTGGTC TTGTTCGTCG TTGGGCTGCG CCATCTGGGG
ACCGCCCGTG CCGGTGCCTA TTTTTCTGTC GCCCCCTTCT GTGGCGCGTT TATCGCGCTG
GCCATGGGCG AACCCTTGAC GACCAGACTT ATCGTGGCCG GTTCGTTAAT GGCCATTGGA
ATTTGGCTGC ACCTGACTGA GCAACATGAG CATGAGCATA CCCATGAAGC CATGGAGCAC
AGCCATGAAC ACCTCCATGA TGAGCATCAT CAGCACGGCC ATGATTACCC GGTGGCGCCA
GGGGGGAAGC ATTCACACAT CCATCGGCAC CAGCCCATTT CCCATACCCA TGCGCACTTT
CCTGATGTGC ACCACGTAAG TCATCCTCAC TAA
 
Protein sequence
MNAQHPFISP GIASALGAAL LFGAGTPLAK LLLQDVSPWL LAGLFYLGSG AGLSLYRLVS 
RAEPVRLPGA ETGWFAGAIL AGGVVGPVLL MYGLSGMPAS GTALLLNAEG VLTALLAWLV
FKENFDYRIA LGMFAIAAGA VVLSWPGEMQ FAGALPALAV LGACLAWAVD NNLTRKVSLA
DATWIAAVKG LVAGTVNLAI AFALGDQLPS LPMLAAALLV GLLAYGISLV LFVVGLRHLG
TARAGAYFSV APFCGAFIAL AMGEPLTTRL IVAGSLMAIG IWLHLTEQHE HEHTHEAMEH
SHEHLHDEHH QHGHDYPVAP GGKHSHIHRH QPISHTHAHF PDVHHVSHPH