| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2237 |
|---|
| Symbol | |
|---|
| ID | 3566424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2417940 |
|---|
| End bp | 2420402 |
|---|
| Gene Length | 2463 bp |
|---|
| Protein Length | 820 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637680706 |
|---|
| Product | putative DNA repair ATPase |
|---|
| Protein accession | YP_285446 |
|---|
| Protein GI | 71907859 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.079976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCTC TTTCACTCAC TCTCAAGGGC TTTCGTGGCA TTCGCGATGG CCTGGGACGC
GATGTCCTGA AACTCGATTT CGAACGACTG GCCGATGGCG CCGAACTGGT CGCCATCGCT
GGCGCCAACG GGCGCGGCAA GACCACCGTG ATGGACAACA TGCACCCGTA CCTGACGATG
CCATCGCGTG CTGCGATGGC CGGTCCGGGC GGTTTCTCCT ACTACGACCA TGTTTGCCTG
CCAGAGAACG AGAAAGATCT GATCTGGGCC CACGAGGGCC GTAGCTATCG CTCGCAGGTC
GTGATCCGCG TGAACGGCAG GCGCAAGACC GAAGCCTTTC TGCTCATGCT TGCCGACGAT
GGCGCATGGA AGCCCGTGGT GCTGGACGAC GGCACCGTGT CAGACGGCAA GGTGGACACC
TATACCCGTT GCGTCGAAGC ACTCTGCGGC AGTGCCGACA CCTTTTTCAC GTCGGTGTTC
TCGGCGCAGG GCAAGCGGCA GTTGAGCGCC TACCGCAATG CCGAGATCAA GACGTTGCTG
GCTGACTTGC TGGGACAGGA AGAAATCCGG GCGCTGGGCC AGCAGGCGGG CGAGACGGCG
CGCCTGCTCA AGGCCGGCCT GGCGGCCATC CGGCAGGAAC AGGCTGGACT GGATGCGGAA
GCGCAGCGTA TCGAGGGTGA ACGGCGCCGG CTCGACGGCG CCCAGGCCCG CGTCGCGCAG
CGCCTTGCGG GTCGCCAAGC GACCCAGGCA GCGCAGGAGT CGGTCCGAAC CCGGCACGCG
CAATTGATGG CGGAGCGCGA GCAGTCGCGC GGGGTGGAAG CGCGCCGGGA GCAACTTCAG
GGCGAATGCC ACGCCGTGAT CCAGGCCGGA ACGCAGGCCA TCGACGCCTT GAAGGCCCAG
GACCAGGGCG AGTCGCAGCG GCTGGAACGG CTGACGCAAC GCATCGCCCA GCGCGTCACC
CAGGAGCGCA ACCGCGGGCA GGGTTTGCAG AACCAGCGCC GGGAATGCCT CACGGTGCTG
GCTGGTGCCC AGGCCGTGCA GCGTGCTGAG CTCCATCTGC CCTTGGCCGA GCGGGTCTTG
TCGCTGCGCT CGGCACAGAT CGGATCTTGG CGCCAACAAG TCCAACGTCT GACGCAGTGC
CAAGCCTCGG AGCGGATGGT CCAGCAGAAA CTCTCCGGGG TCGAGCGCGA GGCCGGCCAG
GCGGCGCTCA AGGCCGAGGA ATTGGCGCGA CGCTTCGGCC TGACCGGGGA GGTGCCGTGT
GCCGGCACTG ATCTGCAGGG GCAATGCCAA CTCCTGGGCG ACGCGCGGGA CGCCAAGGCC
CTGATTCCCA GCGCGCAGGG GACGATCCAG CGGCTGGGGC GCGAGAAGGC GGCGGCACAG
CAGGAACTGG ACGCTTTGCG CGGCCGGCAG GCGGAACTCG CGGGTGCGCC GCAGGCCTTG
GCCTGGGCCG AGCATCGGGC CGAGTTTGCC CGGGAACGGG CGTCGCGGTT TGCGCGGCTA
GCGGCCCAGG CCGGTGAAAT GGCGCGGGCG CGGACCACAC TGGCCGGGAT CGAGCAGGAA
TTGACGGAAC TGCAGGCCGC GCTGGGACCA GACGCCGTTG CCGGTCAGCC GCCGGTGGAG
ACGCCCGAGG AGGCGGCCGA GCGTCAACAG ATCAATGTGG CACGGCAGGC CATCGGCGCC
CAGCACGGCC AGCAGGCCAA GCACTACCGA GCCACCCTGG ATCGGCTCAA TCAGGCGCTG
GCGGCCTTGC CGGAACCTTG CGACGAGCAG CGCCTGATCG ATGCTCAGAC CGCGATGGAA
CAGGCGGCGC AGTCGGTCGC TGCCGCCGAG CAGGCCCACC TGGCTGCGGT GCGGGACGCC
GAAACCCTGG GGGCCGTGGT GCAGCAGGCA ACGGCCCTGG CCGGTCGTCA AGCGCAGGTG
GCCAACCGCA TCGCCAAGGT CGAAACCGAG TTGGGCAACT GGAATCTGTT CGCCAAGTGC
ATGGGCAACG ACGGCCTGAT CGCGCTGACC ATCGATGACG CGGGTCCGAC CTTATCGGGA
CTGGCCAACG ACCTCTTGCT GGCCTGCTAC GGTCCGCGCT TTACGGTATC CATCCAAACC
CTGGTGGAGA CCGGCAAGGG CGAGCAGAAG GAAGGCTTCG ACATCCTGGT GCACGATGGC
GAGTCGGGCG AGAGCAAGAG TGTCGGTCTG ATGAGCGGCG GCGAACGGGT GTGGATCAAC
GAGTGCCTGA TCCGGGCGGT TGCGCTGTAC CTCGCCCAGC ACACGGGGCG ACGCTACGGT
GCACTGTTCT CGGACGAGGC CGATGGACCG TTGGACCCCG AGCGCAAGCG CATGTTCATG
GCGATGAAGC GCGAGGTGCT GCGGCTGGGG GGGTATCAGC GGGAGTTCTT CGTGTCCCAG
ACGCCGGAAC TGACCGCCAT GGCGGATGCG GTGATTGATA TGGATCTTCA GGGCCGCTTG
TAG
|
|---|
| Protein sequence | MQPLSLTLKG FRGIRDGLGR DVLKLDFERL ADGAELVAIA GANGRGKTTV MDNMHPYLTM
PSRAAMAGPG GFSYYDHVCL PENEKDLIWA HEGRSYRSQV VIRVNGRRKT EAFLLMLADD
GAWKPVVLDD GTVSDGKVDT YTRCVEALCG SADTFFTSVF SAQGKRQLSA YRNAEIKTLL
ADLLGQEEIR ALGQQAGETA RLLKAGLAAI RQEQAGLDAE AQRIEGERRR LDGAQARVAQ
RLAGRQATQA AQESVRTRHA QLMAEREQSR GVEARREQLQ GECHAVIQAG TQAIDALKAQ
DQGESQRLER LTQRIAQRVT QERNRGQGLQ NQRRECLTVL AGAQAVQRAE LHLPLAERVL
SLRSAQIGSW RQQVQRLTQC QASERMVQQK LSGVEREAGQ AALKAEELAR RFGLTGEVPC
AGTDLQGQCQ LLGDARDAKA LIPSAQGTIQ RLGREKAAAQ QELDALRGRQ AELAGAPQAL
AWAEHRAEFA RERASRFARL AAQAGEMARA RTTLAGIEQE LTELQAALGP DAVAGQPPVE
TPEEAAERQQ INVARQAIGA QHGQQAKHYR ATLDRLNQAL AALPEPCDEQ RLIDAQTAME
QAAQSVAAAE QAHLAAVRDA ETLGAVVQQA TALAGRQAQV ANRIAKVETE LGNWNLFAKC
MGNDGLIALT IDDAGPTLSG LANDLLLACY GPRFTVSIQT LVETGKGEQK EGFDILVHDG
ESGESKSVGL MSGGERVWIN ECLIRAVALY LAQHTGRRYG ALFSDEADGP LDPERKRMFM
AMKREVLRLG GYQREFFVSQ TPELTAMADA VIDMDLQGRL
|
|---|
| |