| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2221 |
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| Symbol | |
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| ID | 3566447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2399873 |
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| End bp | 2404882 |
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| Gene Length | 5010 bp |
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| Protein Length | 1669 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637680690 |
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| Product | helicase, C-terminal |
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| Protein accession | YP_285430 |
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| Protein GI | 71907843 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG4646] DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.332048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTC CTACCGCGCC TTCCCTGTGG CTGCCCGGTT TCGACCCGGC GGCCCCGACC
CTGCCCCGCC CTGCAGAGCA GGTTTGCCTT TCCGTTTCTT GCGGGCCCGG CGAGCCTGTC
GAAGTCATCC ACGTCGAGAA CCTCAGCGAC GTCGAGCAAG AGCAGTCTGT AGTCTCTGTC
CGCGCCAACT GGCGGGTGGT GGCCACCGCG CCCGAGGCCG CCCCGCGCAT CCTCTGGCCG
CAACTGACCC GCGCCGACCA GGAGCACCTG ACCGGCCCGA CCGCGAAGTT CGAGGCCAAC
TTGGCAGCGA TCACGCTCCT TCGGGAGATC GAAGCCGAAG TCCGGCCGGC CAGTACGGAT
GATCGCCAGG TTCTTCGGCG CTACACCGGC TGGGGCGGCC TGCCCGCCAG CTTCAATCTC
GAAGCCACCG ACAGTGCCTG GGGCGAACGT GCCCGTCGCT TGCAGGCGAT GCTCAGTGCC
GAGGACTTCG AATCGGCGCG CGCCTCCGTC AACAACAGCC ACTACACCGA GGTCCCCGTG
ATCGAGGCGA TATGGCAGGC GGTGGAGCGC TTCGGTTTCA CCGGCGGACG CATCCTGGAA
CCTGCCGCCG GCATCGGCCA TTTCATCGGC GCCATGCCGC GGAATCTGGC CGAGCGCAGC
AGCGTCACTG CCATCGAGAT CGACCGGGTT TCCGGCCGCA TCCTCAACGC GCTCTACGCG
CCCGGCGGCG TGGATGTGCG GATTTCGCCG TTCGAGAAAA CCCCGCTGCC CGACCACTGG
TTCGACCTCG TGATCGGCAA CGTCCCCTTT GGCAAGTACA AGGTCGCCGA CGTGAGCAAC
CGGGCCTATT CCCGCTTCAG CATCCACAAT TACTTCTTCG GCCGCGCCCT CGACCTGGTG
CGCCCCGGTG GGCTGGTGTG CTTCATTACC AGCAGCCACA CGATGGATGG CCAATACGAC
GCGGTGCGCG AGTACATCGC AAGTCAGGCT CACCTGCTGG GTGCCATCCG GCTCCCCAAG
GGCACCTTCG CTGGCATCGC CTCGACCGAA GTGCAGACCG ACATCCTGTT TCTGCGCAAG
CGGCAGCGGG CCGAGACGGT TGAGGCCAAA TGGTTGAAAC TGGGCACGGT GCCCGATAGT
CTCCGGCACC CTCAGTGCTA CGAGCGCTAC CTGCCGATCA ACGCCTGGTA CGCCGAGCAC
CCGCAGTTCT GCATTGGCCG CATCCGCCGC GAGAGCAATG GCTACGAGGA AGTACCGGTC
GCCGTGTTCG AGGGCGACCT GGAGGCGGCC CTGGCCGAGC GCATCGCTTT GCTGCCTGCC
GGTGCTTACC GGCCGGTGGC GCACAAGGCA GCCCCGCTGC GAGTGGTGGT CCCGGCCGAT
GCCGGTGCCC GTCCTGGCAG CTACCATCTC CACCAGGGGC GGGTGCATCG GGTCGAGGGC
AGCGAGATGG TCGACGTCCA TGACCAGCTC AATGCCACGC AGCGGGCCCG CGTCACCGGC
CTGTGTGCCA TCCGCGACCA CGCCCGGGCC CTGCTCGATG CGCAGTTGGC GGATGCGGGC
GACGGTCGGC TGGGTCACCT GCGAGCCATG CTCAATGGGA CCTACGAGCG CTTTGTATCG
CGCTATGGCT GCCTGTCCAC GCGCGCCAAT GCGCTGGCGT TCCGGCGCGA CCCGGACTAT
CCGCTGTTGC TGTCGCTGGA ACATTACGAC GAAGAGGCCG ACACGGCCCG CAAGGCTGCG
CTGTTCTCCC GGCGCACGCT GATCCGTGTC GTCGAACCGA GCACGGCGGC CGAGCCGGCC
GAAGCCCTGG CTGCGTCCAT CCAATGGCGT GGCCGGGTCG ATCCGGCTTA CATGGCCGAA
ATTCTTGGGG CACCCGAAGC TGCGGTGCTG GAGGCCTTGG CCGGAGCGGG GCAGGTGTTC
CTCGACCCGG CCGACGGGGA ATGGAAGACC ACCGACGACT ACCTGTCGGG CAACGTGAAA
GCGAAGATCA AGCAGGCGGT GCTGTCCGGG AGTACCTACC AGCGCAACAT CGACGCGCTG
GAACAGGTGC AACCAGAAGA CCTGCCCCCG GCGGCCATCG AGCCGCGCCT GGGGGCGGTG
TGGATTCCGG CCCTTGATGT CGAGGCGTTC ATCCAGCAGG TCCTGGAACT CAAGGACTGC
CAGGTGGGCT ACTCGGCCGA AGCCGGCGCC TGGTCGGTGA AGTACGGCGA GTGGGAAGCG
CGGCAGAACG TGAAGGTGAC CCAGGAATTC GGCACCTCGC GCATGAACGC GATCGAACTC
GTGCAGTGCG CGCTCAATGT GCAGGTGCCG ACCGTGCGCG ACCGCGATCC GCTGACCGAC
AAGTACTTCG TCAATCCCGA CGAGACGCTG GCGGCGCGGG AGAAGCTGGG CCTGATCAAG
GAGCGGTTCG CCGGCTGGGC CTTCGAAGAT ACCGAACGCC GCGAGAAGCT GTGCAGGATC
TACAACGACC TGTTCAACGC CACGAGGCCC AGGCGCTTCG ATGGCTCGCA CCTGAAGCTG
CCGGGATTCT CCCGCTGCTT CGTGCTGCAT CCGCACCAGC TGGATTCGGT GTGGCGCATC
GTGCAGTCCG GCAACACTGG GCTGTTCCAT GTGGTCGGCG CGGGCAAGAC GGCGGTATGC
GTCATCGCCA GCATGGAGTT GCGCCGGCTG GGTTTCGTCA ATAAGCCCTG CCATGTGGTC
CCCAACCACA TGCTGGCCCA GTACACGGCA GAATTCGTCC GACTCTATCC GAACGCATCG
GTGCTGATGG CGGGCAAGGA GGACCTGGCA GGCGACCGCC GGCGCGAGCT GGTGTCGCGC
ATCGCCACGG GCGATTGGGA CGCGGTAGTC ATCACGCACT CGAGCTTCGA GCGCATCAGG
ATGTCGCCGC GATTCAGCGA GCGATTCATC AAGGAGATCA TCCATGAAAT AGAGATGGCG
GTACGCGCCG AGAAGAGCAA CGACCGGTCC AACCGGATCG TCAAGCAACT CGAGGCGATG
AAGAAGAACT GGACGGTGCG GCTGGAAAAA CTATCGGCCG ACCAGAAGAA GGACGACCTG
CTCAGTTGGG AGTTGCTGGG TATCGACGCC CTGTTCGTGG ACGAGGCCCA CCTGCACAAG
AACCTCTACC GGTTCACCAA GATGACGCGG GTGGCCGGTC TGCCGCTGAC CAGTTCGGAG
CGCGCCTTCG ATCTGTTCCT GAAGACGCGC TACACGATGC AGCTCCACGG GCATGCGCAG
CGTGGGGTGG TATTCGCCAC GGCGACGCCG GTGGCCAACA CCATGGCCGA GATCCACACC
ATGATGCGCT ACCTGCAGCC CAACCGGCTG GCGGAGCTCG GGCTGCAGCA GTTCGATGCC
TGGGCCGCCA CCTTCGGCGA AAGCGTCACG GCGCTGGAGA TCGCGCCGGA CGGCAGCGGC
TATCGGATGC ACACGCGCTT CGCGCGGTTC ATCAACGTGC CAGAGCTGAT GGCGGTGTTC
GGCGAAGTAG CCGATATCCG CACGGCGGAG ATGCTGGACC TGCCGGTGCC GAAGCTGCGC
GGCGGCAAGC CGCGCATCGT CGCCTGCCCG GCCAGTCCGT CGCTGAAAGC CTTCGTGCAG
ACGCTGGTCC AGCGGGCGGA AGCCGTCCGC AACGGCGACG TCAAGCCGAA CGAAGACAAC
ATGCTGGCGA TCACCACCGA CGGCCGCAAG GCCGCGTTGG ATTTCCGGCT GGTGGCGCCG
CTAGCGCGCT TCGACGAGCA CGGCAAGGTG GCCGCCTGTG TGCGGGAGGT CCATACCATC
TGGCAACGCA CGGCGGACTT CCGCGGCGCC CAGTTGGTGT TCTGTGACTT GTCGTCCCCC
AAGGGCGGCA AGAGCTTCAG CGTCTATGAC GATCTGCGGG AGCGGCTGAT CGGTGCGGGC
ATCCCCGAGA AGGAGATTGC CTTCGTCCAT GCTGCCGAGA CCGATGTCCA GAAGGCGACG
CTGTTCAAGG CGGTGCGCGA GGGCCGGGTC CGGGTGCTGC TGGGCTCCAC CGCCAAGATG
GGGGTGGGCA CCAATGTGCA GACACGTCTC ACGGCCCTGC ATCACCTCGA TGCGCCCTGG
CGTCCCTGCG ACGTCGAGCA GCGCGAGGGG CGCATCCTGC GCCAGGGCAA TGAGTGCGAG
GAAGTGGAAA TCTTCCGATA TGTCACGGAA GGCAGTTTTG ACAGTTACAT GTGGCAGACG
CTGGAGACCA AGGCGCGCTT CATCGCCCAG GTGATGAAGG GCGACCAGGG CATCCGGTCG
CTGGAGGATG TGGAATTGGC GGCGCTGTCC TATGCCGAGG TGAAAGCCTT GGCGTCGGGC
AATCCGCTGG TGATCGAGAA GGCCGGCGTG GACGCGGAGG TGGCCAAGCT CTCGACGCTG
TTCTCGGTGT GGCGCAACCA GCGCTATGCC AACGAAAGCG AAGTGGGCCG GCTGCCGATG
ATGATCGAGG CGCTGGAGAA GAAGGTCGCG CTGTACGCAC AGGACGCGGC CCGGATCGAG
CCGCAGACTA TGCAGGGCAT CGCCGTGGAA CTGGCGGGGC GCCGGATCGT CGGCCCCGAT
GGGGTCGGCG AGGCTCTGCG CGGGTTGGTG AGGACGGCCA AGGAAGAGGT ACGCACGGCC
AGCCGGATGA TCGAACGGAT CGTCGGCCGC TTCGGCGGCT TCGACCTCGG TATCCTCGCG
GCCCGCGGCG ACGAGACCCC CAGCCTGTAC CTGGCGGGAC ATTGCCTGTA CAACGCCGAG
CCCTATCAAA CGGGTCCGGC CCTGGTGGCC GCCTTGCTGG CAGCGCTGGA TTCGGTGGGC
AAGCATCACG CCGATGCCGG GATCCAGTTG GAAACTCGCC GCAAGCGGCT GGAAGACCTC
CGGCTGGAGT TGGCCCGCTC ATTCGAGCAC GAAGGCCGGC TGACCAACCT GCTGGTCCGG
CAACGCGAGT TGCTCAAGCA GCTCGACCTG GACAAGGACG AAGCCGGTAG CGCGAAGGTC
GACGCCGACG AGGCACGGCA AGCCGCTTGA
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| Protein sequence | MARPTAPSLW LPGFDPAAPT LPRPAEQVCL SVSCGPGEPV EVIHVENLSD VEQEQSVVSV
RANWRVVATA PEAAPRILWP QLTRADQEHL TGPTAKFEAN LAAITLLREI EAEVRPASTD
DRQVLRRYTG WGGLPASFNL EATDSAWGER ARRLQAMLSA EDFESARASV NNSHYTEVPV
IEAIWQAVER FGFTGGRILE PAAGIGHFIG AMPRNLAERS SVTAIEIDRV SGRILNALYA
PGGVDVRISP FEKTPLPDHW FDLVIGNVPF GKYKVADVSN RAYSRFSIHN YFFGRALDLV
RPGGLVCFIT SSHTMDGQYD AVREYIASQA HLLGAIRLPK GTFAGIASTE VQTDILFLRK
RQRAETVEAK WLKLGTVPDS LRHPQCYERY LPINAWYAEH PQFCIGRIRR ESNGYEEVPV
AVFEGDLEAA LAERIALLPA GAYRPVAHKA APLRVVVPAD AGARPGSYHL HQGRVHRVEG
SEMVDVHDQL NATQRARVTG LCAIRDHARA LLDAQLADAG DGRLGHLRAM LNGTYERFVS
RYGCLSTRAN ALAFRRDPDY PLLLSLEHYD EEADTARKAA LFSRRTLIRV VEPSTAAEPA
EALAASIQWR GRVDPAYMAE ILGAPEAAVL EALAGAGQVF LDPADGEWKT TDDYLSGNVK
AKIKQAVLSG STYQRNIDAL EQVQPEDLPP AAIEPRLGAV WIPALDVEAF IQQVLELKDC
QVGYSAEAGA WSVKYGEWEA RQNVKVTQEF GTSRMNAIEL VQCALNVQVP TVRDRDPLTD
KYFVNPDETL AAREKLGLIK ERFAGWAFED TERREKLCRI YNDLFNATRP RRFDGSHLKL
PGFSRCFVLH PHQLDSVWRI VQSGNTGLFH VVGAGKTAVC VIASMELRRL GFVNKPCHVV
PNHMLAQYTA EFVRLYPNAS VLMAGKEDLA GDRRRELVSR IATGDWDAVV ITHSSFERIR
MSPRFSERFI KEIIHEIEMA VRAEKSNDRS NRIVKQLEAM KKNWTVRLEK LSADQKKDDL
LSWELLGIDA LFVDEAHLHK NLYRFTKMTR VAGLPLTSSE RAFDLFLKTR YTMQLHGHAQ
RGVVFATATP VANTMAEIHT MMRYLQPNRL AELGLQQFDA WAATFGESVT ALEIAPDGSG
YRMHTRFARF INVPELMAVF GEVADIRTAE MLDLPVPKLR GGKPRIVACP ASPSLKAFVQ
TLVQRAEAVR NGDVKPNEDN MLAITTDGRK AALDFRLVAP LARFDEHGKV AACVREVHTI
WQRTADFRGA QLVFCDLSSP KGGKSFSVYD DLRERLIGAG IPEKEIAFVH AAETDVQKAT
LFKAVREGRV RVLLGSTAKM GVGTNVQTRL TALHHLDAPW RPCDVEQREG RILRQGNECE
EVEIFRYVTE GSFDSYMWQT LETKARFIAQ VMKGDQGIRS LEDVELAALS YAEVKALASG
NPLVIEKAGV DAEVAKLSTL FSVWRNQRYA NESEVGRLPM MIEALEKKVA LYAQDAARIE
PQTMQGIAVE LAGRRIVGPD GVGEALRGLV RTAKEEVRTA SRMIERIVGR FGGFDLGILA
ARGDETPSLY LAGHCLYNAE PYQTGPALVA ALLAALDSVG KHHADAGIQL ETRRKRLEDL
RLELARSFEH EGRLTNLLVR QRELLKQLDL DKDEAGSAKV DADEARQAA
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