| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2220 |
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| Symbol | |
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| ID | 3566446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2398642 |
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| End bp | 2399322 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637680689 |
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| Product | GGDEF |
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| Protein accession | YP_285429 |
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| Protein GI | 71907842 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.244171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTCCA ATTCCCAGCG GCGACATCGG CGCTCGGTCG TCATGCAGCG CATCGCGGGT
CTGGAGCGGG CGCTGGAACA GGCGCAGCAC CTCCTCCACC AGGACGATCT CACTCCGCTC
CTGAACCGCC GCGGATTCCG GCGCGCCTGC GACCGGTGGG CCGGCAACGG CCCGATGGCA
ATGTCGGCCT GCTGCGCGAT GATCGACCTG GATGGCTTCA AGGCCATCAA CGACCGCCAC
GGCCACCCAG TCGGCGACGC CGCGCTGGCT CACTTCGCGA CGACGCTGCG CCGGCATCTG
CGTCCCGCCG ACACCATCGC GCGGCTGGGT GGCGACGAGT TCGCCTTGAT CCTCATGGAA
TGCAGCGGCG ACGATGCGTG CCTGCTGCTG GAACGCCTGC AGCAGGCACT CGCCGGATCA
CCCCTGTCAG TGCCGGGTGG CGCCGTGCCG CTGCGGTTCT CTGCCGGTGT CGCCGAGCTT
CATGCTGCTG AATCGCTGGG GCAGGTGTTG GAGCGTGCCG ATGCCGCCTT GCTCGATGCG
AAGCAGCTGG GCAAGGCGAT GGTCCGCCTG AGCATTCCAC CGGCGCGCTC TGCGCAGGCG
GCCACGGCGA CTGCGTGCGA CCGTCAGACT GCTTCAGCGT CCGTTCCCAT CGCCATCGAT
GAACGGGAAA GCGACGGGTA G
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| Protein sequence | MHSNSQRRHR RSVVMQRIAG LERALEQAQH LLHQDDLTPL LNRRGFRRAC DRWAGNGPMA
MSACCAMIDL DGFKAINDRH GHPVGDAALA HFATTLRRHL RPADTIARLG GDEFALILME
CSGDDACLLL ERLQQALAGS PLSVPGGAVP LRFSAGVAEL HAAESLGQVL ERADAALLDA
KQLGKAMVRL SIPPARSAQA ATATACDRQT ASASVPIAID ERESDG
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