Gene Daro_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2198 
Symbol 
ID3566653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2373387 
End bp2374382 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content58% 
IMG OID637680667 
Productaminodeoxychorismate lyase 
Protein accessionYP_285407 
Protein GI71907820 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.955684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACCC TGACCAAGAT TCTTTTCGCT GTTTTTGTGT TGTTCGCGAT CGCGGCTGGC 
GGGCTGTGGT GGTGGGCAAA TCAGCCATTG TCGCTGCGCT CTTCACCGCT CGATTTTCGT
ATTGCGGCCG GTAGCAGCCT GCGTTCGGCG ATTACCCAGA TGCGGGAGTC GGGTATTGAG
GTCGAGCCTG GCTTGCTCGC CTTCCTGGCA CGGCTTAACC GGGCCGATAC GGCCATCAAG
GCAGGTAGCT ATGCGGTCAA GGATGGGGTA ACCCCGATCC GCCTGCTGGA TAAATTGCTC
AAGGGCAAAG TTACGCAAGG TGAACTGACC CTGGTTGAAG GCTGGACTTT TCGGCAATGG
CGAGCCCGTC TGGATAAACA TCCGGATCTG AAGCACGAAT TGCTTGGCTT GAGCGAAGCG
GAAATCATCG AAAAGCTGGG TTTGAGCGTT GCAGGACTGG AAGGGCAGTT GTTCCCGGAT
ACTTATCTGT TCGACAAACA ATCCAGCGAT CTCGAACTGC TCGCGCGGGC CCAGCGGGCC
ATGCAGCGCA AACTGGATGC GGAATGGGCA GGCCGCGCCG CCGGTCTTCC CTACAAAACT
TCGAATGACG CGCTGATCAT GGCATCCATC GTCGAGAAAG AAACCGGGCG CGAATCGGAT
CGAGAGCTCG TTGCCGCAGT CTTCGTCAAT CGCTTGCGCA AAGGGATGTT GCTGCAGACT
GATCCGACTG TGATCTACGG CATTGGCGAG AAATTTGATG GCAATCTGAG AAAGCGCGAC
CTGCTCACGG ACACCCCGTA CAATACCTAC ACCCGTCCTG GCTTGCCGCC AACGCCGATC
GCGATGCCGG GGCAGGCTTC CATCAGGGCG GCGCTGAATC CGGCGCCCAG CGACGTCATC
TATTTCGTGG CTCGAGGCGA TGGCAGCAGT GAATTTTCCC GGACCCTGGA CGAACACAAC
CGGGCGGTTA ACAAATATCA GAGAGGTGGG AAGTGA
 
Protein sequence
MRTLTKILFA VFVLFAIAAG GLWWWANQPL SLRSSPLDFR IAAGSSLRSA ITQMRESGIE 
VEPGLLAFLA RLNRADTAIK AGSYAVKDGV TPIRLLDKLL KGKVTQGELT LVEGWTFRQW
RARLDKHPDL KHELLGLSEA EIIEKLGLSV AGLEGQLFPD TYLFDKQSSD LELLARAQRA
MQRKLDAEWA GRAAGLPYKT SNDALIMASI VEKETGRESD RELVAAVFVN RLRKGMLLQT
DPTVIYGIGE KFDGNLRKRD LLTDTPYNTY TRPGLPPTPI AMPGQASIRA ALNPAPSDVI
YFVARGDGSS EFSRTLDEHN RAVNKYQRGG K