Gene Daro_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2179 
Symbol 
ID3566673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2352804 
End bp2353373 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content52% 
IMG OID637680648 
Productputative lipoprotein 
Protein accessionYP_285388 
Protein GI71907801 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000000000218689 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTT CCGGCTGTGC TCAGGTTTCC GCCTTGCAGA TGGCCGGAAC CGCTGTGGGG 
ATGGTTCTCG AAGCGACGGG CGTCACCAAG AAAGACAATG GCGACCAAAG CAAAATCACC
AAAGATCTGC CAATAAGGAT TTTTGCCGGT GATCAGTTAA ATTTGACTAG CAACAGCAAA
CCGCTGTCCC TGGTCATCAA GATTTACGTT TTGCGTTCTT CTGAACGCCT TAAAACACTC
ACCTACCCGC AGATAACCTC CACCGAGAGC GAAAAGGAGG CTCTTGGCGA TGAGTTGATT
TCAGTCCGTG AAATTATTCT GCTCCCCGGA AAATCCTACG ACGCTGTTCT AAAGATTCCC
GGAGATGCCA CAACGATCGG TGTCGTTGGC ATGTTTCGCG CGCCGTATTC GTCCAGATGG
AAACTCGCTT TCGACAGCAA GCAGTCATTC GATAGCGGAA TCACCATCGG GGCGCACGCC
TGTGCCCTGA GCGCCAGCAA AGGCGCCTTG GTCACCGAAA TCAGCCCTGA ATCAGTGCGA
TCACTGGTCG GCATCCAATG CAACTCTTAA
 
Protein sequence
MLLSGCAQVS ALQMAGTAVG MVLEATGVTK KDNGDQSKIT KDLPIRIFAG DQLNLTSNSK 
PLSLVIKIYV LRSSERLKTL TYPQITSTES EKEALGDELI SVREIILLPG KSYDAVLKIP
GDATTIGVVG MFRAPYSSRW KLAFDSKQSF DSGITIGAHA CALSASKGAL VTEISPESVR
SLVGIQCNS