Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2178 |
Symbol | |
ID | 3566672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2351961 |
End bp | 2352578 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637680647 |
Product | putative lipoprotein |
Protein accession | YP_285387 |
Protein GI | 71907800 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000000000103894 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACCT TTAAACGTCT GTCAGTTGCA CTTGTTTTCA GTGCCTCGGT GGCGATTTCT GGTTGTGCCG GCAACAAGCC ATCGATGAGC CAGGAAGAGT TTTCTGCTGC AATGGCTCAA TCCAGCATGA GCGTAGATTC CTTGTTGGAA AAGGGTAACC AGGAGGAAGC GGTAAAAGTT CTCGGTGATT TGGCAAAAAG GAATCCTGGG CGAAAGGAAC CTTGGATACG CATGGCCAAG GTGCATTTCG ACGCCGAGAA CTACGCGCAG GCGATTGTTG CGGCCGAAGA GGCTTTGCAG CGCGATGGTA CGGATCGATC GGCAAAAAGT ATTCGTGCTG TCGCCGGCTT GAGGGTGGCG GCCCAGTCTT TGACTGATCT GCGTGGAGAT GTCGAGTTGA AAGGTGATGC TCGCTCTGAT GCCGTTGGCT TGGCCAAGGT CATGCGCGAT ACCTTGGGCG AGGATGTGTT GGTTCCGCCA GGTGAAGAGA AGAAAAAGAA GGCGATACCT GTAGCTCGTC CCAAACCAGT GGCGGCAACA ACTCCCAAAA AGGCCAGCGC GGCGGCGGAT ACCGCGCCAG CGGCATCTGG TGCCAATCCG TTCAGCCTTT TGAAGTGA
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Protein sequence | MFTFKRLSVA LVFSASVAIS GCAGNKPSMS QEEFSAAMAQ SSMSVDSLLE KGNQEEAVKV LGDLAKRNPG RKEPWIRMAK VHFDAENYAQ AIVAAEEALQ RDGTDRSAKS IRAVAGLRVA AQSLTDLRGD VELKGDARSD AVGLAKVMRD TLGEDVLVPP GEEKKKKAIP VARPKPVAAT TPKKASAAAD TAPAASGANP FSLLK
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