Gene Daro_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2178 
Symbol 
ID3566672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2351961 
End bp2352578 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content54% 
IMG OID637680647 
Productputative lipoprotein 
Protein accessionYP_285387 
Protein GI71907800 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000000000103894 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACCT TTAAACGTCT GTCAGTTGCA CTTGTTTTCA GTGCCTCGGT GGCGATTTCT 
GGTTGTGCCG GCAACAAGCC ATCGATGAGC CAGGAAGAGT TTTCTGCTGC AATGGCTCAA
TCCAGCATGA GCGTAGATTC CTTGTTGGAA AAGGGTAACC AGGAGGAAGC GGTAAAAGTT
CTCGGTGATT TGGCAAAAAG GAATCCTGGG CGAAAGGAAC CTTGGATACG CATGGCCAAG
GTGCATTTCG ACGCCGAGAA CTACGCGCAG GCGATTGTTG CGGCCGAAGA GGCTTTGCAG
CGCGATGGTA CGGATCGATC GGCAAAAAGT ATTCGTGCTG TCGCCGGCTT GAGGGTGGCG
GCCCAGTCTT TGACTGATCT GCGTGGAGAT GTCGAGTTGA AAGGTGATGC TCGCTCTGAT
GCCGTTGGCT TGGCCAAGGT CATGCGCGAT ACCTTGGGCG AGGATGTGTT GGTTCCGCCA
GGTGAAGAGA AGAAAAAGAA GGCGATACCT GTAGCTCGTC CCAAACCAGT GGCGGCAACA
ACTCCCAAAA AGGCCAGCGC GGCGGCGGAT ACCGCGCCAG CGGCATCTGG TGCCAATCCG
TTCAGCCTTT TGAAGTGA
 
Protein sequence
MFTFKRLSVA LVFSASVAIS GCAGNKPSMS QEEFSAAMAQ SSMSVDSLLE KGNQEEAVKV 
LGDLAKRNPG RKEPWIRMAK VHFDAENYAQ AIVAAEEALQ RDGTDRSAKS IRAVAGLRVA
AQSLTDLRGD VELKGDARSD AVGLAKVMRD TLGEDVLVPP GEEKKKKAIP VARPKPVAAT
TPKKASAAAD TAPAASGANP FSLLK