| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2173 |
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| Symbol | |
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| ID | 3569815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2346957 |
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| End bp | 2348789 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637680642 |
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| Product | hypothetical protein |
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| Protein accession | YP_285382 |
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| Protein GI | 71907795 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.0216331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGATC TGCTGCCTTA TTACGAGCGA GAGCTGGCGT TTTTGCGCCA GCATTCCCGC
GAGTTCGCCG AGCGCTACCC GAAGCTTTCT GCACAGTTGT TGCTGTCGGG CGAGGGCTGC
GACGACCCGC ATGTCGAGCG GATGATCCAG TCCTTCGCGT TGCTGACGGC GCGGGTTTCC
AAAAAGCTGG AAGACAGCTA CCCGCAATTC ACTGAAGCAC TGCTCAACGT CCTCTACCCG
CACTATCTGC GGCCGTTTCC GAGTTGCTCC ATCGCTCATT TCGAACATGG CGGCGGTGAG
CTGACCTCAG TTGCGACCAT CTTGCGGGGA ACAGAGTTGC AATCCCGACC GATCAAGGGT
GCCGTCTGCA AGTTCCGGAC GGCATGGGAT GTTCAACTGG CGCCGGTTTC CATTGGCGAG
CTGGCATTCG ATCCGGTGGC CAGTGCGCCC AGCGAAGTAC GTCTGCCGGT CGGTTGTAAT
GCCATTCTTT CGTTTTCGCT TACCTTGCGT GGCAACAACC CCGAGGCCGG GCTGGGCAAG
CTCGAGAAGT TGCGGGTCTA TATCGATGCC GAGCCGTCGG TCGCTTCGGC GCTGCGCGAC
GCCATTTTCC TGCGCAAATT GAAAGTTTAT GCCGTCGGTG CAGACGAGCG CTGGCGTATC
GCGCGGGAGA AGCTGATCAG CGAGGTCGGC TTTGCCGATC AGGAGGCGCT GATCGACATG
CCGGACACGT CACACGGCGC CTATCGCTAC CTGACCGAGT ATTTCTGTTT CCCGGAGAAA
TTCAATTTTT TTGATATCAA CATCGGCGAG ATTCCTTCCG GCTTGCACGC CGAAGGGAAG
ATATCCCTTC ACATCGCGCT CGGTGATCTG CGGGCGGACA GTGATGCCTC CCGTTTGCTG
CAAACGCTAA CCACGCAGAA CCTGCGCTTG GGTTGTGTGC CGGTAGTCAA TCTGTTTGCC
CAGCGGGGTG ATCCGATCCG GATCAGCAAT CGCCAGACGG CCTATCCGGT GGTTGCCGAC
GGGCGACGGG CTTACGCCTA CGATGTTTAT TCGATTGACT CGGTCCGACG AGTCCGCCAA
AGCGCGCAGG GCGAAGCGAT TACCGAGTTT CGCTCCTTCT TTTCGCTGCG CCATGGCGAA
ACCCCGGAGC GCAACGGCTA TTACTGGTAT GCCCAGCGTG ATCACCTGGT TGCAGAAAGC
AGCCCGGGTT ACGAAACCTC GCTGTCCATC GTCGATGCCG ATTTCGACCC GGTGCAGCCG
AAGACCGACG TGCTCAGCCT GCAGCTGACC TGCACCAATC GCGAATTGCC GACCTTAATG
TCAGTCGGCA TGCCGTCCGG CGACCTGTTT CTCGAAGGCG GCTCGAGCGT TCGTTCGATC
AAGCTGCTGC GTAAACCGAC TCAGCCCTAT CGTTTCGATC ATCGACGGGA TGGTCAGTGG
CGGATCATTT CGCATCTGTC GCTGAATCAT CTGTCGCTGA CCGGCAATGG TCTCAAGGCA
TTCCAGGAGA TGCTGGCGCT CTACGATCTG CCGAGAACGG CGGCCAGCCG CCGGCAGATC
GAAGGCGTGC TCGATATCGA GCAGCGAGAC AAAACGGTGT GGATGGCCGG AAAACCGTTT
GCCTGCTTTG TGCGAGGCCA GGAGGTTCGC ATCACCATTG ACGAATCCAG CTTCGTCGGC
AGCGGTCTTG ATGTGTTCGT TCGCTGCATC GACCGCTTCC TCGGCCTGTA CGTCAGTCTC
AACAGCTTCA TTCAACTGGT TGTGGTTTCC AATCGAACCG GAGAGGAATT GATCCGATGC
GCACCTCGCA ACGGCGACTC GATCCTGGCC TAG
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| Protein sequence | MEDLLPYYER ELAFLRQHSR EFAERYPKLS AQLLLSGEGC DDPHVERMIQ SFALLTARVS
KKLEDSYPQF TEALLNVLYP HYLRPFPSCS IAHFEHGGGE LTSVATILRG TELQSRPIKG
AVCKFRTAWD VQLAPVSIGE LAFDPVASAP SEVRLPVGCN AILSFSLTLR GNNPEAGLGK
LEKLRVYIDA EPSVASALRD AIFLRKLKVY AVGADERWRI AREKLISEVG FADQEALIDM
PDTSHGAYRY LTEYFCFPEK FNFFDINIGE IPSGLHAEGK ISLHIALGDL RADSDASRLL
QTLTTQNLRL GCVPVVNLFA QRGDPIRISN RQTAYPVVAD GRRAYAYDVY SIDSVRRVRQ
SAQGEAITEF RSFFSLRHGE TPERNGYYWY AQRDHLVAES SPGYETSLSI VDADFDPVQP
KTDVLSLQLT CTNRELPTLM SVGMPSGDLF LEGGSSVRSI KLLRKPTQPY RFDHRRDGQW
RIISHLSLNH LSLTGNGLKA FQEMLALYDL PRTAASRRQI EGVLDIEQRD KTVWMAGKPF
ACFVRGQEVR ITIDESSFVG SGLDVFVRCI DRFLGLYVSL NSFIQLVVVS NRTGEELIRC
APRNGDSILA
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