| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2171 |
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| Symbol | |
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| ID | 3569813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2343212 |
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| End bp | 2345911 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637680640 |
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| Product | AAA ATPase, central region:Clp, N terminal |
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| Protein accession | YP_285380 |
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| Protein GI | 71907793 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.203695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCT CCCTGAAAAC CCTGATCAGC AAACTGAATA GCACCTGCCG CCAGGCAGCC
GAACGCGCCG CCAGTCTGTG CATGTCGCGC GGCAATTACG AGGTTGATCT TGAGCACCTG
TTGATCGCGA TTCTCGAAAA TCCCGGGGCA GACCTGCTGG TCATCGGCAA GCGTTGCGGT
ATCAGCCCGA CCGGCCTGGA GCGCGAACTG AACCAGGAAA TCGACCGCTT CAAGACCGGC
AATACCCGGA CGCCGGTTTT CTCGACGCAC ATTCTCAAGC TCTTCGAACA AGCCTGGCTG
ATCGCCTCGC TCGATGCCCG CCTGCCGCGC ATTCGTTCCG GCCACCTGTT GCTGGCGCTG
CTGACCGAGC CGGAGCTGTC GCAACTGGCT TTCCGTGGTT CCAAACTGCT GGGCAAGGTT
CGTTTGGACG AACTGAAGCA CAACTTCGAC CAGATGACCG AAGGCTCGGC CGAAGCGGCC
GAAGTAGCCG GCCTGGCAGC GTCGGCTGAG GGCGGAGATG AATCCGACCC CTTGCTCGCC
GGTAGCCCGC AAGGTGGCAA GACACCGGCG CTTGACCAAT TCACCACCAA CCTGACGCAA
CGGGCTCGCG ATGGCAAGGT TGATCCGGTG ATCGGCCGTG ACAGCGAAAT TCGTCAGGTG
ATCGACATCC TGATGCGGCG CCGCCAGAAC AATCCGATCC TGACCGGTGA GGCCGGTGTC
GGCAAGACCG CCGTTGTCGA AGGGTTGGCC TTGCGCATCG CCCAGGACGA TGTGCCGCCA
CCGCTGCTCG GAGTCGAACT GCACACGCTG GACATGGGGC TGCTGCAGGC CGGCGCCAGC
GTCAAGGGCG AGTTCGAGAA CCGCCTGAAA AACGTCATCG ATGAGGTCAA GAAGAGCGTC
AAGCCGATCA TCCTGTTCAT CGACGAAGCC CACACCATGA TCGGGGCAGG GGGGCAGTCC
GGCCAGAACG ACGCGGCCAA CCTGCTCAAG CCGGCGCTGG CACGCGGCGA GTTGCGCACC
GTGGCGGCAA CGACCTGGGC CGAGTACAAG AAATACTTCG AGAAGGATGC CGCGCTGGCT
CGCCGCTTCC AGGGCGTCAA AGTCGAGGAG CCAACCGAGA TACTGGCCTC TGCCATGTTG
CGCGGCATGG TGCCGTTGAT GGAAAAGCAT TTCGGTATTC GCGTTCTCGA CGAAGCCGTG
ACCGAAGCGG TTCGCCTGTC GCACCGCTAC ATCAGCGGCC GCCAACTGCC GGACAAGGCA
ATCAGCGTGC TCGACACGGC TTGTGCCAAG GTGGCGCTTG GCCAGAGTGC CACGCCAGCC
TTGATAGACG AAGCTGACAA GCGGCTGCTG CGCGAGCGGG CCGAACTGGC CGCCCTTGAA
CGCGAAGCCG CCAGCGGCGC CTGGCACGAT ACGCGGATCA AGGAACTCAA GGCGCAGATT
TCCGCCATCG AATCTGATCT CAGCATCTTC AAGACGCGTT TTGAAGAAGA AAAAACCTTG
GTCAATCGCG TTCTCGAACT GCGTGGACAG CTCGAAAATG GCGAGGTGGC CGTCGACGCC
GCACCAAAAC CCAAAGCCAG GGCGCGCAAG AAAGGCGAGG GCGAAGCGGT CGGTGATAGC
GAACTCGACA AGGCCCTGGC GCGTCTGCGC GAGTTGCAGG GCGAGTCGCC GATGGTTCCG
CTGCAGGTCG ATGGTCACGT CGTCGCCGAG ATCATTGCCG CCTGGACCGG TATTCCGCTC
GGCAAAATGG TCAAGAACGA GATCAACACT GTCCTCAACC TGAAGCCGCT CCTAAAGGAA
CGGGTCATCG GCCAGGATCA TGCGCTGGAG GCTGTGGCCC AGCGCGTTCG CACCGCCCGC
GCCTACCTCG AAGACCCGAA CAAGCCGAAA GGCGTCTTCA TGTTTGTCGG CCCCTCCGGT
GTCGGCAAGA CCGAAACCGC CCTGGCGCTG GCCGATATCC TCTACGGCGG CGAACGCAAG
CTGGTTACCA TCAATATGAG CGAATACCAG GAAGCTCACT CGGTGTCCGG TCTCAAGGGC
TCGCCACCGG GCTACGTTGG CTACGGCGAA GGCGGGGTGC TGACCGAAGC CGTGCGGCGC
AATCCCTATA GCGTTGTCCT GCTCGATGAA GTGGAGAAGG CTCACCCGGA CGTGCTGGAA
CTCTTCTTCC AGGTCTTCGA CAAGGGCGTC CTCGACGATG CCGAAGGCCG TGAAATCGAT
TTCCGCAACA CCCTGATCAT CCTGACCAGC AATGTCGGTT CGACGCAGAT CATGCAGTCC
TGTCTGAACA AGCCGGCCGA AGAACTGCCG GAAGCCGATG CGCTGGCCGA TGCCCTGCGC
CCGATCCTGT TCAAGTCCTT CAAGCCGGCC TTCCTTGGCC GTATGAAGGT GGTTCCTTAC
TACCCGATCT CCGACGACGT GCTGGTCAGC ATCATCGAAC TCAAGCTCGG CCGCATCCGT
GACCGGATTG CCGCCAACCA CAAGGCTGAG TTCATCTGGG ACGACAAGCT GGTCGAAGCC
GTGCTGGCTC GCTGCACAGA GGTCGATTCC GGGGCGCGCA ACGTCGATCA CATCCTCAAC
GGCACCCTGT TGCCCGAGAT CGCCGAGGTG GTATTGGCCC GCATGGCTGA AGGCGCTGCG
GTCGAGCGCA TCAAGGTAGG GGCCGGCAAG AGCGGTGAAT TCAAATACGC CATCAAGTAA
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| Protein sequence | MSTSLKTLIS KLNSTCRQAA ERAASLCMSR GNYEVDLEHL LIAILENPGA DLLVIGKRCG
ISPTGLEREL NQEIDRFKTG NTRTPVFSTH ILKLFEQAWL IASLDARLPR IRSGHLLLAL
LTEPELSQLA FRGSKLLGKV RLDELKHNFD QMTEGSAEAA EVAGLAASAE GGDESDPLLA
GSPQGGKTPA LDQFTTNLTQ RARDGKVDPV IGRDSEIRQV IDILMRRRQN NPILTGEAGV
GKTAVVEGLA LRIAQDDVPP PLLGVELHTL DMGLLQAGAS VKGEFENRLK NVIDEVKKSV
KPIILFIDEA HTMIGAGGQS GQNDAANLLK PALARGELRT VAATTWAEYK KYFEKDAALA
RRFQGVKVEE PTEILASAML RGMVPLMEKH FGIRVLDEAV TEAVRLSHRY ISGRQLPDKA
ISVLDTACAK VALGQSATPA LIDEADKRLL RERAELAALE REAASGAWHD TRIKELKAQI
SAIESDLSIF KTRFEEEKTL VNRVLELRGQ LENGEVAVDA APKPKARARK KGEGEAVGDS
ELDKALARLR ELQGESPMVP LQVDGHVVAE IIAAWTGIPL GKMVKNEINT VLNLKPLLKE
RVIGQDHALE AVAQRVRTAR AYLEDPNKPK GVFMFVGPSG VGKTETALAL ADILYGGERK
LVTINMSEYQ EAHSVSGLKG SPPGYVGYGE GGVLTEAVRR NPYSVVLLDE VEKAHPDVLE
LFFQVFDKGV LDDAEGREID FRNTLIILTS NVGSTQIMQS CLNKPAEELP EADALADALR
PILFKSFKPA FLGRMKVVPY YPISDDVLVS IIELKLGRIR DRIAANHKAE FIWDDKLVEA
VLARCTEVDS GARNVDHILN GTLLPEIAEV VLARMAEGAA VERIKVGAGK SGEFKYAIK
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