| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2160 |
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| Symbol | |
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| ID | 3569802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2329984 |
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| End bp | 2331159 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637680630 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_285370 |
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| Protein GI | 71907783 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 0.879337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCCAA CCTCAAAATT CCCTCGCAAG GCCCTGCCCT TCGTCGTTTC AGCCATCATT
GGCGCACTGG CTGTCGCCGG GTGTTCCGGC GACAAGACCG CTGGCGGACC ACCCAAAATG
GGGCCAATGC CGGTCACTGT CCTCGACATG CAACCGCAGA AGGTGCCGTC GAGCATCGAG
ATCATGGCGC AAACCGAAGG CGCCCGCGAA ACTGAAGTCC GTGCCCGTGT CGGCGGCATT
CTGACCAAGC GTCTCTATCA GGAAGGCGAA ACCGTCAAGG CCGGCCAGCC GCTATTCCAG
ATCGACCGCT CCCCTTATGA AATCGCTCTC GCCGAGGCCA AGGCCAAGGC CGAGCAGACT
GCCCGCGAAG TGGGCCGCCT GAAAGGCTTG GCCGAAGCCA AGGCAATCGC CCAGAAAGAC
TATGACGATG CCGTCTCCGC CAATGCGATG GCTCAGGCCG CCTTGCACCA GGCCGAACTG
AATCTTTCCT GGACCACCGT GACGGCGCCG GTCGCCGGCA CCACCGGCCG CGCCATCAAA
TCGGACGGCA ACCTGATCTC AACCGGCGAC AGCCTGCTGA CCTCTATTTA CCAGACCAAC
CCGATCTGGG TCCGCTTCAG CCTGGGCGAA AGCGATCTGG CGAAATTCCC GTCTGGCCGC
ATCAGCACCA AGGACGTCAA GGGCGTCGAA CTGGTCATGG CCAATGGCCA GAAATATGAG
AAGCCCGGCA AAGTCAATTT CCTCGCGACC AACATCGATA CCACCCTGGG TACCCAGGCT
TTGCGCGCCG AATTCGACAA CGCCGGCGGC CAGCTGCTGC CCGGCCAGTT CGTCCGTGTC
CGCCTGCTAA CCGGTGAGCG CGATGGTGTC TATCTGGTGC CGCAATCAGC CGTACTTCAA
ACCGAGCAAG GCACGCTGGT CATGACCGCC GGCCCGGAAA ACAAGGTTGC CCCCCGCCCG
GTCAAGGCCG GCGAGTGGTA CGGCAAGGAC TGGGTCATCC TCGGCGGCCT GAATGCTGGC
GACAAAGTCA TTGTGGACAA TCTGATCAAG CTGCGTCCTG GCATGCCGGT CGATCCGCAT
CCGCCAGTTG TGCCCGGCGC CGAGCAAGCT GGCAGCAAGC CGCAGGAAGT AGCCGGCAAA
TCGGGAACAT CCGCCACCAC CCGTACGCAA CAGTAA
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| Protein sequence | MTPTSKFPRK ALPFVVSAII GALAVAGCSG DKTAGGPPKM GPMPVTVLDM QPQKVPSSIE
IMAQTEGARE TEVRARVGGI LTKRLYQEGE TVKAGQPLFQ IDRSPYEIAL AEAKAKAEQT
AREVGRLKGL AEAKAIAQKD YDDAVSANAM AQAALHQAEL NLSWTTVTAP VAGTTGRAIK
SDGNLISTGD SLLTSIYQTN PIWVRFSLGE SDLAKFPSGR ISTKDVKGVE LVMANGQKYE
KPGKVNFLAT NIDTTLGTQA LRAEFDNAGG QLLPGQFVRV RLLTGERDGV YLVPQSAVLQ
TEQGTLVMTA GPENKVAPRP VKAGEWYGKD WVILGGLNAG DKVIVDNLIK LRPGMPVDPH
PPVVPGAEQA GSKPQEVAGK SGTSATTRTQ Q
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