Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2148 |
Symbol | |
ID | 3569790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2317395 |
End bp | 2318723 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637680618 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_285358 |
Protein GI | 71907771 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.383237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATC ACCCGGTCTT TCTGGTCGAG GACGATGCCG CCGTTCGCAA GGGCTGCGAG CAGGCCTTGT CGCTGGCTGA CATTGCGGTG CGCGGCTTTG CCGATGGCGA ATCCATGCTC GCTGCGCTGG CGACATCAAG CCCGGCCTTG GTGGTGACCG ATGTCCGCCT GCCCGGCAAG GACGGCCTCA GCCTGTTGCG CGAACTGCGC CAGCTTGACC GCGAACTGCC GGTGCTGCTG ATGACTGGTC ACGGTGACGT GGCGATGGCC GTCGAAGCCA TGCGCGAAGG GGCTTACGAT TTCATCGAAA AGCCGTTTCC TTCTGAGCGC CTGATCGCCG CCGTGCGCAG CGCCCTGGAA AAAAGGGCGC TGATTCTGGA GAACCGCCTG CTGAAGGAGC GTATCGGCGA CAACGGCGTG GCCCCTATCA TCGGCCAGTC GCCGGCCATG CAGCATATCC GGCAACTGGT CGCCACGCTG GCGCCGACCG GCGTCGATAT CCTGATTAAC GGCGAAACCG GCAGTGGCAA GGAGGTCGTG GCTCGTGCCA TTCACGAAGC CAGCGGCCGG CGTGGCCCTT TCGTCGCGAT CAATTGCGGC GCCTTGCCGG AAACGGTGTT CGAGAGCGAA TTGTTCGGCC ACGAAGCCGG CGCCTTCACC GGGGCAGGGA AGCGACGTAT CGGCCGCATC GAGCACGCCA ACGGCGGCAC ACTGTTTCTC GATGAAATCG AATCGATGCC GCTCAACCTA CAGGTCAAGC TGCTGCGGGT GTTGCAGGAA CGCTGTGTCG AACGACTCGG CAGTAATGCT TCGATTCCGG TCGATTGCCG TCTCGTCGCG GCCAGCAAGG TCGATCTCAA GGCGGCCTCG GAGGCTGGCC AGTTTCGGGC TGACGTTTAT TATCGGCTCA ATGTCGTCAG TCTCGAATTG CCGCCGCTGC GCCAGCGTCG CGAAGATATT CCGCTCCTGA TGGCGCATTT CCTGCACGAA GCGGCGCAGC GCTTCTCGCG GCCGGATGCG GTCTGGTCGG CGGCCGAACT GGCCCGCTGG TCAGCTCATG CCTGGCCCGG CAATGTTCGC GAACTGAAGA ATGTGGCCGA ACGCTGGGCG CTCGGCTTGC CTGATGCGCT GGGGGGCAAC GCAATCCAGC CAGACACCAC GCTGCCGCTG GCCGAGCAGG TCGATATCGC CGAGCGCGCC ATTATCGAAA CCGTCCTTGG CCAATCGGCC GGCAATGTGG CCCGGGCCGC TGAACTGCTG CAGACGCCGA AGAAGACGCT TTACGACAAG CTGGTTCGCC ACGGGATCAA TGTCGAGAGC TTCCGGTAG
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Protein sequence | MADHPVFLVE DDAAVRKGCE QALSLADIAV RGFADGESML AALATSSPAL VVTDVRLPGK DGLSLLRELR QLDRELPVLL MTGHGDVAMA VEAMREGAYD FIEKPFPSER LIAAVRSALE KRALILENRL LKERIGDNGV APIIGQSPAM QHIRQLVATL APTGVDILIN GETGSGKEVV ARAIHEASGR RGPFVAINCG ALPETVFESE LFGHEAGAFT GAGKRRIGRI EHANGGTLFL DEIESMPLNL QVKLLRVLQE RCVERLGSNA SIPVDCRLVA ASKVDLKAAS EAGQFRADVY YRLNVVSLEL PPLRQRREDI PLLMAHFLHE AAQRFSRPDA VWSAAELARW SAHAWPGNVR ELKNVAERWA LGLPDALGGN AIQPDTTLPL AEQVDIAERA IIETVLGQSA GNVARAAELL QTPKKTLYDK LVRHGINVES FR
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