Gene Daro_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2148 
Symbol 
ID3569790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2317395 
End bp2318723 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content64% 
IMG OID637680618 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_285358 
Protein GI71907771 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.383237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC ACCCGGTCTT TCTGGTCGAG GACGATGCCG CCGTTCGCAA GGGCTGCGAG 
CAGGCCTTGT CGCTGGCTGA CATTGCGGTG CGCGGCTTTG CCGATGGCGA ATCCATGCTC
GCTGCGCTGG CGACATCAAG CCCGGCCTTG GTGGTGACCG ATGTCCGCCT GCCCGGCAAG
GACGGCCTCA GCCTGTTGCG CGAACTGCGC CAGCTTGACC GCGAACTGCC GGTGCTGCTG
ATGACTGGTC ACGGTGACGT GGCGATGGCC GTCGAAGCCA TGCGCGAAGG GGCTTACGAT
TTCATCGAAA AGCCGTTTCC TTCTGAGCGC CTGATCGCCG CCGTGCGCAG CGCCCTGGAA
AAAAGGGCGC TGATTCTGGA GAACCGCCTG CTGAAGGAGC GTATCGGCGA CAACGGCGTG
GCCCCTATCA TCGGCCAGTC GCCGGCCATG CAGCATATCC GGCAACTGGT CGCCACGCTG
GCGCCGACCG GCGTCGATAT CCTGATTAAC GGCGAAACCG GCAGTGGCAA GGAGGTCGTG
GCTCGTGCCA TTCACGAAGC CAGCGGCCGG CGTGGCCCTT TCGTCGCGAT CAATTGCGGC
GCCTTGCCGG AAACGGTGTT CGAGAGCGAA TTGTTCGGCC ACGAAGCCGG CGCCTTCACC
GGGGCAGGGA AGCGACGTAT CGGCCGCATC GAGCACGCCA ACGGCGGCAC ACTGTTTCTC
GATGAAATCG AATCGATGCC GCTCAACCTA CAGGTCAAGC TGCTGCGGGT GTTGCAGGAA
CGCTGTGTCG AACGACTCGG CAGTAATGCT TCGATTCCGG TCGATTGCCG TCTCGTCGCG
GCCAGCAAGG TCGATCTCAA GGCGGCCTCG GAGGCTGGCC AGTTTCGGGC TGACGTTTAT
TATCGGCTCA ATGTCGTCAG TCTCGAATTG CCGCCGCTGC GCCAGCGTCG CGAAGATATT
CCGCTCCTGA TGGCGCATTT CCTGCACGAA GCGGCGCAGC GCTTCTCGCG GCCGGATGCG
GTCTGGTCGG CGGCCGAACT GGCCCGCTGG TCAGCTCATG CCTGGCCCGG CAATGTTCGC
GAACTGAAGA ATGTGGCCGA ACGCTGGGCG CTCGGCTTGC CTGATGCGCT GGGGGGCAAC
GCAATCCAGC CAGACACCAC GCTGCCGCTG GCCGAGCAGG TCGATATCGC CGAGCGCGCC
ATTATCGAAA CCGTCCTTGG CCAATCGGCC GGCAATGTGG CCCGGGCCGC TGAACTGCTG
CAGACGCCGA AGAAGACGCT TTACGACAAG CTGGTTCGCC ACGGGATCAA TGTCGAGAGC
TTCCGGTAG
 
Protein sequence
MADHPVFLVE DDAAVRKGCE QALSLADIAV RGFADGESML AALATSSPAL VVTDVRLPGK 
DGLSLLRELR QLDRELPVLL MTGHGDVAMA VEAMREGAYD FIEKPFPSER LIAAVRSALE
KRALILENRL LKERIGDNGV APIIGQSPAM QHIRQLVATL APTGVDILIN GETGSGKEVV
ARAIHEASGR RGPFVAINCG ALPETVFESE LFGHEAGAFT GAGKRRIGRI EHANGGTLFL
DEIESMPLNL QVKLLRVLQE RCVERLGSNA SIPVDCRLVA ASKVDLKAAS EAGQFRADVY
YRLNVVSLEL PPLRQRREDI PLLMAHFLHE AAQRFSRPDA VWSAAELARW SAHAWPGNVR
ELKNVAERWA LGLPDALGGN AIQPDTTLPL AEQVDIAERA IIETVLGQSA GNVARAAELL
QTPKKTLYDK LVRHGINVES FR