Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2146 |
Symbol | |
ID | 3569788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2313501 |
End bp | 2315639 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637680616 |
Product | C-terminal processing peptidase-1 |
Protein accession | YP_285356 |
Protein GI | 71907769 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.19614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGAC GCCCGCGACA AGCGATGGAT GGACTGTCCA GCCCCCTTTG GAGAACTACC TTGTTGAAGC AACTCTGCTG GATCGTCCTC GGCCTTACCG TCAGCGCACA AGCGGCCGAA CTGGCACCGC AACCGCAGCA CCAGCGCGTC GTCCGGATCA GCGCCGCCCT GCTCGGCCAT TACCATTACA AACCGGCAGT CCTCGACGAT GCCCTGTCAG AGGCGATCTT CGAGCGCTAT CTGAAGACGC TCGATAGCGA AAAATACTAT TTCACCCAGA GCGACATCGA CCAGCTCAGT GAATACCGAA CCCGGCTCGA CGATGCGATC ATCGAAGAGA ACCTGCAAGC GCCATTTGCC ATCTTCAACC TTTACGCGCG CCGGGCGGAG GAACACTTTT CCTATGCCCG CAGCCTGCTC AAAGGCGGTT TCCGCTTCGA TCAGAACGAC CGCTTCACCT TTGTCCGCGA CAAGGCCGAA TGGGCAAGCT CCGACGAAGC ATTGCGCGAA ATCTGGCAGC AGCGCGTCAA GAACGACTGG CTGCGCCTGA AACTGGCTGG CAAGAGCGAT CCTGAGATCG TTACCGCCCT CGACAAACGC TATGAGCAAT CGATCCGGCG CATCAACCGT CTGAAGAGCG ACGACGCTTT CCAGATGTTC ATGAACGCCT ACACCACCGC CATCGAGCCC CATACCACCT ACCTCGGGCC GCGTGCTTCG GCTGACTTCG ACATATCGAT GCGCCTGTCA CTGACCGGCA TTGGTGCGGT GCTGCAGGAA CGAAACGATT ACACCATGGT CCGCGAAGTG ACCCCCGGCG GGCCGGCCGC CCGTTCCGGC CAGCTCAAGG CTGGTGACCG AATCGTTGCC GTCGCCCAGG GCGAGAAAGG CGCCTTCGTC GATGTCGTCG GCGCCCGTCT CGATGACACG GTTGCCCTGA TCCGCGGCGC GGCCGACAGC GTGGTTCGCC TCGACATTTT GCCGGCCAAC GCTGGCCCGG ATGCCAAACA TCGACAGATA ACGCTGGTCC GCAAGAAGGT CGACCTGGCC CAGCAAGCGG CCAAGAAAGC CGTCCTCGAC GTCACGGACA ATGGCAGCGC CCGGCGCATC GGCGTGATTA CCCTGCCCGC CTTCTACGAC GACTTCGAAG GCCGCCGCAA GGGCGACCCG AACTTTCGGA GCGCCACCCG CGATGTGGCG AAGCTGCTCA AGGAACTGGG CAAGGAGAAG GTTGATGGGG TCGTGCTCGA CCTGCGCCAC AACGGCGGCG GTTCGCTGAA GGAAGCCATC GAGCTGACCG GACTGTTCAT CGACACCGGG CCGGTCGTCA TGGAACGCAA TGCACAGGGC CAGGTTTTTG TCGATGGCGA CACTACTCCC GGCACCGCCT GGGATGGCCC GCTGGGGGTA CTGATCGATG GCGAATCGGC CTCGGCCTCC GAGATTTTTG CGGCAGCCAT TCAGGACTAC GGCCGGGGTA TCGTCATCGG CGAGCAGAGT TATGGCAAGG GCACCGTCCA GACCGTACTC AACCTCGACC AGGCTGTCGG CAGCGAGAAG CCGGCGCTTG GCGAACTGCG GATGACCATC GCCCAGTTTT TCCGGATCAA TGGCAGCACC ACGCAAGTAC GCGGCGTCCA GCCGGACATC GCCCTGCCGG CCGCCAATGA TCCGACGCTG ACCGGTGAGG CCAGCAACGA CAATGCCCTG CCCTGGACGC ACATCCGCGC TGCCGCCTAC GACCGGGTTG CCGACAAGGG CGAGGTGATT CCCGCCCTGC TCGCCCGCCA TGTCGCGCGG GCGGCCAACG ACCCGGAATT TCAGCGCCTC GAAGAAACGG CCTCGGAACT CCAGCGATTA CGCCTGCAAA CGAGCGTCTC CTTGAACGAA GCAGAAAGAC GCCGCGAAAA TGAAAGCCTG GAAAAACGCC TAAGCGGGCT GGCTCGTGCC GACGACGGCC TGCTCGATAG CGAACGCGAA CCCGATACGG ACGGCAAGGA TGAAAAGGCG GGCAACAAAG CCAAGGATAC CCGACTGCTC GCGGCAGCCC GCATCATCGC GGACGAAGTC GATCTACAAC GCGAGAAGGG CAAACCGGGC GCTCTCGAGC GGCCAAACCA GGCGGCAATC AACCGATAG
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Protein sequence | MTRRPRQAMD GLSSPLWRTT LLKQLCWIVL GLTVSAQAAE LAPQPQHQRV VRISAALLGH YHYKPAVLDD ALSEAIFERY LKTLDSEKYY FTQSDIDQLS EYRTRLDDAI IEENLQAPFA IFNLYARRAE EHFSYARSLL KGGFRFDQND RFTFVRDKAE WASSDEALRE IWQQRVKNDW LRLKLAGKSD PEIVTALDKR YEQSIRRINR LKSDDAFQMF MNAYTTAIEP HTTYLGPRAS ADFDISMRLS LTGIGAVLQE RNDYTMVREV TPGGPAARSG QLKAGDRIVA VAQGEKGAFV DVVGARLDDT VALIRGAADS VVRLDILPAN AGPDAKHRQI TLVRKKVDLA QQAAKKAVLD VTDNGSARRI GVITLPAFYD DFEGRRKGDP NFRSATRDVA KLLKELGKEK VDGVVLDLRH NGGGSLKEAI ELTGLFIDTG PVVMERNAQG QVFVDGDTTP GTAWDGPLGV LIDGESASAS EIFAAAIQDY GRGIVIGEQS YGKGTVQTVL NLDQAVGSEK PALGELRMTI AQFFRINGST TQVRGVQPDI ALPAANDPTL TGEASNDNAL PWTHIRAAAY DRVADKGEVI PALLARHVAR AANDPEFQRL EETASELQRL RLQTSVSLNE AERRRENESL EKRLSGLARA DDGLLDSERE PDTDGKDEKA GNKAKDTRLL AAARIIADEV DLQREKGKPG ALERPNQAAI NR
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