Gene Daro_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2146 
Symbol 
ID3569788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2313501 
End bp2315639 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content62% 
IMG OID637680616 
ProductC-terminal processing peptidase-1 
Protein accessionYP_285356 
Protein GI71907769 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.19614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAC GCCCGCGACA AGCGATGGAT GGACTGTCCA GCCCCCTTTG GAGAACTACC 
TTGTTGAAGC AACTCTGCTG GATCGTCCTC GGCCTTACCG TCAGCGCACA AGCGGCCGAA
CTGGCACCGC AACCGCAGCA CCAGCGCGTC GTCCGGATCA GCGCCGCCCT GCTCGGCCAT
TACCATTACA AACCGGCAGT CCTCGACGAT GCCCTGTCAG AGGCGATCTT CGAGCGCTAT
CTGAAGACGC TCGATAGCGA AAAATACTAT TTCACCCAGA GCGACATCGA CCAGCTCAGT
GAATACCGAA CCCGGCTCGA CGATGCGATC ATCGAAGAGA ACCTGCAAGC GCCATTTGCC
ATCTTCAACC TTTACGCGCG CCGGGCGGAG GAACACTTTT CCTATGCCCG CAGCCTGCTC
AAAGGCGGTT TCCGCTTCGA TCAGAACGAC CGCTTCACCT TTGTCCGCGA CAAGGCCGAA
TGGGCAAGCT CCGACGAAGC ATTGCGCGAA ATCTGGCAGC AGCGCGTCAA GAACGACTGG
CTGCGCCTGA AACTGGCTGG CAAGAGCGAT CCTGAGATCG TTACCGCCCT CGACAAACGC
TATGAGCAAT CGATCCGGCG CATCAACCGT CTGAAGAGCG ACGACGCTTT CCAGATGTTC
ATGAACGCCT ACACCACCGC CATCGAGCCC CATACCACCT ACCTCGGGCC GCGTGCTTCG
GCTGACTTCG ACATATCGAT GCGCCTGTCA CTGACCGGCA TTGGTGCGGT GCTGCAGGAA
CGAAACGATT ACACCATGGT CCGCGAAGTG ACCCCCGGCG GGCCGGCCGC CCGTTCCGGC
CAGCTCAAGG CTGGTGACCG AATCGTTGCC GTCGCCCAGG GCGAGAAAGG CGCCTTCGTC
GATGTCGTCG GCGCCCGTCT CGATGACACG GTTGCCCTGA TCCGCGGCGC GGCCGACAGC
GTGGTTCGCC TCGACATTTT GCCGGCCAAC GCTGGCCCGG ATGCCAAACA TCGACAGATA
ACGCTGGTCC GCAAGAAGGT CGACCTGGCC CAGCAAGCGG CCAAGAAAGC CGTCCTCGAC
GTCACGGACA ATGGCAGCGC CCGGCGCATC GGCGTGATTA CCCTGCCCGC CTTCTACGAC
GACTTCGAAG GCCGCCGCAA GGGCGACCCG AACTTTCGGA GCGCCACCCG CGATGTGGCG
AAGCTGCTCA AGGAACTGGG CAAGGAGAAG GTTGATGGGG TCGTGCTCGA CCTGCGCCAC
AACGGCGGCG GTTCGCTGAA GGAAGCCATC GAGCTGACCG GACTGTTCAT CGACACCGGG
CCGGTCGTCA TGGAACGCAA TGCACAGGGC CAGGTTTTTG TCGATGGCGA CACTACTCCC
GGCACCGCCT GGGATGGCCC GCTGGGGGTA CTGATCGATG GCGAATCGGC CTCGGCCTCC
GAGATTTTTG CGGCAGCCAT TCAGGACTAC GGCCGGGGTA TCGTCATCGG CGAGCAGAGT
TATGGCAAGG GCACCGTCCA GACCGTACTC AACCTCGACC AGGCTGTCGG CAGCGAGAAG
CCGGCGCTTG GCGAACTGCG GATGACCATC GCCCAGTTTT TCCGGATCAA TGGCAGCACC
ACGCAAGTAC GCGGCGTCCA GCCGGACATC GCCCTGCCGG CCGCCAATGA TCCGACGCTG
ACCGGTGAGG CCAGCAACGA CAATGCCCTG CCCTGGACGC ACATCCGCGC TGCCGCCTAC
GACCGGGTTG CCGACAAGGG CGAGGTGATT CCCGCCCTGC TCGCCCGCCA TGTCGCGCGG
GCGGCCAACG ACCCGGAATT TCAGCGCCTC GAAGAAACGG CCTCGGAACT CCAGCGATTA
CGCCTGCAAA CGAGCGTCTC CTTGAACGAA GCAGAAAGAC GCCGCGAAAA TGAAAGCCTG
GAAAAACGCC TAAGCGGGCT GGCTCGTGCC GACGACGGCC TGCTCGATAG CGAACGCGAA
CCCGATACGG ACGGCAAGGA TGAAAAGGCG GGCAACAAAG CCAAGGATAC CCGACTGCTC
GCGGCAGCCC GCATCATCGC GGACGAAGTC GATCTACAAC GCGAGAAGGG CAAACCGGGC
GCTCTCGAGC GGCCAAACCA GGCGGCAATC AACCGATAG
 
Protein sequence
MTRRPRQAMD GLSSPLWRTT LLKQLCWIVL GLTVSAQAAE LAPQPQHQRV VRISAALLGH 
YHYKPAVLDD ALSEAIFERY LKTLDSEKYY FTQSDIDQLS EYRTRLDDAI IEENLQAPFA
IFNLYARRAE EHFSYARSLL KGGFRFDQND RFTFVRDKAE WASSDEALRE IWQQRVKNDW
LRLKLAGKSD PEIVTALDKR YEQSIRRINR LKSDDAFQMF MNAYTTAIEP HTTYLGPRAS
ADFDISMRLS LTGIGAVLQE RNDYTMVREV TPGGPAARSG QLKAGDRIVA VAQGEKGAFV
DVVGARLDDT VALIRGAADS VVRLDILPAN AGPDAKHRQI TLVRKKVDLA QQAAKKAVLD
VTDNGSARRI GVITLPAFYD DFEGRRKGDP NFRSATRDVA KLLKELGKEK VDGVVLDLRH
NGGGSLKEAI ELTGLFIDTG PVVMERNAQG QVFVDGDTTP GTAWDGPLGV LIDGESASAS
EIFAAAIQDY GRGIVIGEQS YGKGTVQTVL NLDQAVGSEK PALGELRMTI AQFFRINGST
TQVRGVQPDI ALPAANDPTL TGEASNDNAL PWTHIRAAAY DRVADKGEVI PALLARHVAR
AANDPEFQRL EETASELQRL RLQTSVSLNE AERRRENESL EKRLSGLARA DDGLLDSERE
PDTDGKDEKA GNKAKDTRLL AAARIIADEV DLQREKGKPG ALERPNQAAI NR