| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2145 |
|---|
| Symbol | |
|---|
| ID | 3569787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2312153 |
|---|
| End bp | 2313268 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637680615 |
|---|
| Product | L-alanine dehydrogenase |
|---|
| Protein accession | YP_285355 |
|---|
| Protein GI | 71907768 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.147893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCG GCGTACCGAA GGAAATCAAG AATAATGAAT ATCGGGTCGG ACTCACACCG
GCCAGCGTAC GCGAGCTGGT GGCGCATGGT CATCGCGTGA TCGTGCAGAA GAATGCCGGC
ACTGCCATCG GCCTGACTGA TGCGCTCTAC GCAGGTGCCG GAGCCGAATT GGTCGACACC
GCCGATGAGG TGTTTATCCG GGCCGAACTC ATCGTCAAGG TCAAGGAACC GCAACCCAAC
GAATGCCGCC AACTCAGGGA TGGACAGGTG CTTTTCACCT ACCTGCACCT GGCCCCGGAC
CGTCGCCAGA CCGAATTGCT GCTGGCCTCG GGGGTCACCG CCATTGCTTA TGAAACGGTG
ACTGGCCCGG GCGCCAGCCT CCCCCTGCTC GCCCCGATGA GCGAGGTCGC CGGGCGAATG
TCTATCCAGG CCGGAGCCGC AGCGCTCGAA AAATCGAAAG GGGGGTCCGG TGTTCTGCTC
GGCGGCGTTC CCGGCGTCGC GCCGGGGAAA GTCACCATCC TCGGCGGTGG CGTGGTTGGC
TACAACGCTG CGCAGATCGC GGTCGGCATG GGGGGTGACG TCACCGTCAT CGACCGATCA
CTGGATCGTC TGCGCTGGCT GGATCGCCAG TTTGGCAATC GAATCAGGAC GCTGTATGCA
ACCGCCGAAT CGATCGAAGC CAGCGTCAGC GAGGCTGATC TGACCATCGG CGCCGTCTTG
ATTCCCGGCG CCTCGGCACC GCATCTGGTC AGCCGCGAAC TGCTGAAACG GATTCGCCCG
GGTTCCGTGC TGGTCGATGT GTCAATCGAC CAGGGCGGCT GCTTCGAGAC GAGCCGACCG
ACTACCCATG CCGAACCGAC CTATATCGTC GACGACATCG TGCATTACTG CGTCGCCAAC
ATGCCGGGGG CCGTAGCGCG AACCTCGACT TTCGCCCTGA ACAACGCCAC CCTTCCCTTC
GTACTGACGC TGGCGAACAA GGGTTATCGC CAGGCCCTGC GCGATGATCC AAACTTGCGG
GCCGGGCTGA ACATTCACCG CGGCAAGCTC ACCTGCGCAC CGGTCGGCGA GGCCCTTCAG
ATCCCTGTCT GCGATCCGGA GGCGGAATTA GCCTGA
|
|---|
| Protein sequence | MQIGVPKEIK NNEYRVGLTP ASVRELVAHG HRVIVQKNAG TAIGLTDALY AGAGAELVDT
ADEVFIRAEL IVKVKEPQPN ECRQLRDGQV LFTYLHLAPD RRQTELLLAS GVTAIAYETV
TGPGASLPLL APMSEVAGRM SIQAGAAALE KSKGGSGVLL GGVPGVAPGK VTILGGGVVG
YNAAQIAVGM GGDVTVIDRS LDRLRWLDRQ FGNRIRTLYA TAESIEASVS EADLTIGAVL
IPGASAPHLV SRELLKRIRP GSVLVDVSID QGGCFETSRP TTHAEPTYIV DDIVHYCVAN
MPGAVARTST FALNNATLPF VLTLANKGYR QALRDDPNLR AGLNIHRGKL TCAPVGEALQ
IPVCDPEAEL A
|
|---|
| |