Gene Daro_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2137 
Symbol 
ID3569779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2305171 
End bp2305818 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content64% 
IMG OID637680608 
Productputative cysteine desulfurase 
Protein accessionYP_285348 
Protein GI71907761 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.26763e-17 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000090972 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCCGAACT GCATTCGGCA CGAGATCGCT GGCGTGCAGC GCAGCAGCGG AGTCTGGAAT 
TCGCGGTGCG CGAATTTCCG TCCCGCGAAG CGCTCAATCG GTCCGACCGG GATCGGCGTG
GTCTACGGCA AGAAGGCGCT GCTGGAGCAG ATGCCTCCCT GGCAGGGGGG CGGCAACATG
ATTGCTGACG TCACCTTCGA GAAGACGTTG TTCCAGCCGG CACCGAACAA GTTCGAAGCT
GGTACTGGCA ACATCGCCGA CGCGGTAGGG CTGGGCGCTG CTTTGGATTA CGTCGACCGC
ATCGGCATCG AGAACATTGC CCGCTACGAG CACGACCTGC TGGTCTATGC GACGCGCGGC
CTGTCCTTGA TTCCTGGCGT GCGCCTGATC GGCACGGCGG CGGACAAGGC GAGCGTGGCG
TCCTTCGTGC TGGCCGGTTA CACGACGGAG GAAGTGGGCC GGGCGTTGAA CGAGGAAGGC
ATCGCGGTGC GCTCCGGTCA CCACTGCGCC CAGCCGATTC TGCGTCGCTT CGGCGTCGAG
GCGACCGTTC GTCCTTCACT GGCGTTCTAC AACACCTGTG AGGAAATCGA CCGCATGCTG
GCTGTGGTAC GTCGTTTGGC CCGTGGCAAG GGCAAGGTTG CGGCCTGA
 
Protein sequence
MPNCIRHEIA GVQRSSGVWN SRCANFRPAK RSIGPTGIGV VYGKKALLEQ MPPWQGGGNM 
IADVTFEKTL FQPAPNKFEA GTGNIADAVG LGAALDYVDR IGIENIARYE HDLLVYATRG
LSLIPGVRLI GTAADKASVA SFVLAGYTTE EVGRALNEEG IAVRSGHHCA QPILRRFGVE
ATVRPSLAFY NTCEEIDRML AVVRRLARGK GKVAA