| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2127 |
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| Symbol | |
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| ID | 3567543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2297070 |
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| End bp | 2298701 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637680599 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_285339 |
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| Protein GI | 71907752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0012846 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00364123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAGTT ACGAAAGCAT CACCGTCGCT TCAATCCTGG GGACCAGCCT CGACGCGGTG
TTCACGATCG ATGAGCGAGG TCGTATCGTC GATTTGAATG ACGCGGCAGT AAGGATGTTC
GGTCGGAGCC GCGAGGAATT CCTGGGCAGC AATATTTCCT GCATTGTGCC TAGCCCGCTC
AAAGAACAGC ATGACGGCTT CCTCGCTGCG TTCAGCCCTG ACCGGGGGAT CAAGCATGTG
CTCGGCAGCG GCCAGCGACT GGATGGCGAG CGCAAGGACG GCACTCGCTT TCCCGTCGAG
GTTGGTATTT CCGCCTTCGT CCAGGGCGGC AAGCGCTATT TCACGGGTTT CGTCCGCGAC
ATGAGCGAGC GCCAACGAAA CGAAGACCAC ATGCACTTCC TGGCCATTCA CGACACGGAT
AGCGGACTAC TCAACTACCG GGGCTTTTGC GGCAGCCCGC TGCCCGCGGA CGGCGAAGCC
CAGGTCGTTT TCATTCGTCT TGAAGAGTTC AGACGCCTGG CAGTTGCCTA CAATCGGCAT
TGGAGCGAGG CCACGCTGCA TGAGTTCGCG CTGCGCCTGC AGGGATTTCT GAAGCCCGGC
GAGATGGCGG CGCGGGTGCG CGAGGACGCC TTTGCCGTCC TGATTCCGGG TGACGCCGGC
AGCCGGGTCG AAAGCTTGCG ACAATTGCTG AGAAAACCGC TCACGCAGGG CAGCATGTAC
TTCCCGCTGA CCTGCACGAT CGGCATTTCC CGGCCCCTGG GCAGCATCGA GCAACGCCTG
CATGACGCTC AACTGGCTTG CGACCGAGCC GGCCCGCAGG GCAAAGGCCG CGTTAACGCG
TTCGACGACG AGATGTGTCG GCGGACGCAG CGCGAGTTGC AGATTGAAAC CCACCTGCGC
AAAACGCTGC ATAACGGCGG GCTGTCCCTC GCCCTGCAAC CGAAAATTCG CTTGGCTGAT
CGCCGGATTG CCGGGGCCGA AGCGCTTGTT CGCTGGATCG ATGATGAACT TGGCCTGGTC
CAGCCGAGTG AATTCATTCC AATCGCCGAA CGCCTTGGGC TGATTGGCTG CATCACAGAC
GAGGTAATGC GCCAGTCGAT GCGCGAGATC GCCGCCTGCG CCGACCAGTC GATTACCGTT
GCCGTCAATT TATCCGCACT CGATTTTCTC CAGCCACATC TTGTCACCAA AATCGGCAAA
CTCCTCGCCG AGAACCAGGT CGATCCTGCA AAACTGGTCA TCGAACTGAC CGAGTCGGTG
GTGGCCAACG ACGCCAAGCT CGTCACGGCG CGCATGCATG AAGTCAAGGC GCTGGGTGCC
GCCATCTCGC TCGATGACTT CGGTACCGGC TATTCATCCT TGTCCTATCT CCGTCAATTC
CCTATCGATT CGCTCAAGAT CGATATCTCG TTTGTCCGCG ACATGCCGGA AAAGGCCGAT
GCGGTTGCCA TCACCACGGC CATTGTCGCG ATGGCCAAGG CGCTAGATCT TGAGACCATC
GCCGAAGGCG TCGAGACGGA AGAGCAAGCC GATTTGCTCG GCATGCTGAA AGTCGATCTT
TGTCAGGGCT ACCTGTTCGG CAAACCGGTC TCACCTAGCG AGTTCCATAA CCTGGTGCGG
CGCACCGGGT AA
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| Protein sequence | MFSYESITVA SILGTSLDAV FTIDERGRIV DLNDAAVRMF GRSREEFLGS NISCIVPSPL
KEQHDGFLAA FSPDRGIKHV LGSGQRLDGE RKDGTRFPVE VGISAFVQGG KRYFTGFVRD
MSERQRNEDH MHFLAIHDTD SGLLNYRGFC GSPLPADGEA QVVFIRLEEF RRLAVAYNRH
WSEATLHEFA LRLQGFLKPG EMAARVREDA FAVLIPGDAG SRVESLRQLL RKPLTQGSMY
FPLTCTIGIS RPLGSIEQRL HDAQLACDRA GPQGKGRVNA FDDEMCRRTQ RELQIETHLR
KTLHNGGLSL ALQPKIRLAD RRIAGAEALV RWIDDELGLV QPSEFIPIAE RLGLIGCITD
EVMRQSMREI AACADQSITV AVNLSALDFL QPHLVTKIGK LLAENQVDPA KLVIELTESV
VANDAKLVTA RMHEVKALGA AISLDDFGTG YSSLSYLRQF PIDSLKIDIS FVRDMPEKAD
AVAITTAIVA MAKALDLETI AEGVETEEQA DLLGMLKVDL CQGYLFGKPV SPSEFHNLVR
RTG
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