| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2119 |
|---|
| Symbol | |
|---|
| ID | 3567535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2289843 |
|---|
| End bp | 2291174 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637680592 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_285332 |
|---|
| Protein GI | 71907745 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0773675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATG CACAAAGTGC CACGCTGCCC GCCAACATGT CGGCGAATCA TGCCGAACTG
GACGGCGCGT ATCGCAAGGT AACCCTGCAC CTCATTCCCT TCATTTTTAT TTGCTACCTG
TTCAATTACC TGGACCGGGT CAATGTCGGC TTCGCGAAGT TGCAGATGAT CGACGCTCTG
AAATGGAGCG AAACGATCTA CGGTCTTGGC GCCGGAATCT TTTTTATCGG CTATGTCCTG
AGCGGCGTGC CGAGCAACCT CCTGCTGCAC CGTCTCGGTG CCCGCAAGGT GATCGGCACC
CTGATGATTG CCTGGGGCAT CGCCTCGGCC TCGCTGATGT TCGTCAAGAC CCCGGAAGCC
TTCTACACGC TGCGCTTCAT CACCGGCGTC TTCGAAGCCG GCTTCTTCCC CGGCATCGTG
CTCTACTTCA CCAACTGGTT CCCGGCCTCG CGACGCGGCC GGATCATGGG CCTCTTCATG
TCGGCCATTC CCATCTCCGG GCTTCTGGGG AGCCCGCTCT CGGGCTGGAT GATGCAGTCC
TTTGCCGGTC AGGGCGGCCT CGCCGGCTGG CAATGGATGT TCCTTCTGCA GGGCATTCCG
ACCGTGCTGC TCGGCCTCCT TGTTTATGTG ATGCTCAATG ACGGTATCGC CCAGGCGAAA
TGGCTGAGCA CCGATGAAAA GCAGATGCTG ATCGCCGAAC TGGAAAAGGA CGAAAAAAAT
CGCCGCGAAA GCAGTCTGGC GGCCGACACT TTTGCCAGCG TGCTGCGTAA TCCGCATGTC
TGGCTACTCG GCCTGGTCTA CTTCTGCATC CAGATGGGGG TCTATGCCAT CAACTTCTGG
CTGCCGAGCA TCATCAAATC GCTCGGCTTC CAGAGCCCGC TGACCGTTGG CTGGATCAGC
GCCATTCCTT ATCTGTGCGC CAGCATCTTC ATGATCTGGA TCGGCCGCTC CGGCGACGCC
CGCAAGGAAC GTCGCTGGCA CTTGAGCGGT CCGCTGCTGA TGGGCCTGTG CGGTCTGATG
ATTGCCACCA TGGCCGGCGG CAACGCTGTC ATCGCCGTCT TCGGTCTCTC CCTGGCAACG
ATGGGGGCGC TGTCCGGCCT GCCGATGTTC TGGCCGCTGC CGACCGCCTT CCTGGGCAGC
GCCGCCGCAG CCGGTGGCCT CGCCCTGATC AACTCGCTCG GCCAGATCGC CGGTTTCATC
AGCCCCTTCC TGGTCGGCTG GATCAAGGAT GCCACGGGCG GCACCACGGT CGCGCTCTAC
ATCCTGTCCG GTGTGCTCTT CTTCGGCGCC ATGCTGGTCT TGCGTGTCCC GGCCAAAATC
GTCAATCGCT AA
|
|---|
| Protein sequence | MANAQSATLP ANMSANHAEL DGAYRKVTLH LIPFIFICYL FNYLDRVNVG FAKLQMIDAL
KWSETIYGLG AGIFFIGYVL SGVPSNLLLH RLGARKVIGT LMIAWGIASA SLMFVKTPEA
FYTLRFITGV FEAGFFPGIV LYFTNWFPAS RRGRIMGLFM SAIPISGLLG SPLSGWMMQS
FAGQGGLAGW QWMFLLQGIP TVLLGLLVYV MLNDGIAQAK WLSTDEKQML IAELEKDEKN
RRESSLAADT FASVLRNPHV WLLGLVYFCI QMGVYAINFW LPSIIKSLGF QSPLTVGWIS
AIPYLCASIF MIWIGRSGDA RKERRWHLSG PLLMGLCGLM IATMAGGNAV IAVFGLSLAT
MGALSGLPMF WPLPTAFLGS AAAAGGLALI NSLGQIAGFI SPFLVGWIKD ATGGTTVALY
ILSGVLFFGA MLVLRVPAKI VNR
|
|---|
| |