Gene Daro_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2100 
Symbol 
ID3566996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2260275 
End bp2261225 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content60% 
IMG OID637680573 
Productformate/nitrite transporter 
Protein accessionYP_285313 
Protein GI71907726 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA AAATTGACTT CGGCCACGAC GATCACCATG CCGATGGCGG CTTCAAAACC 
GCCCCGCATG CCGAATCGAT CGCCGCACTG TCGCTCGACC CGCTGTTGCC CGATGCCGTT
GCCCTGGCCG CCGAAGATGT CGGCGTCAAG AAAGCCAAGC AAAAGCTGTG GACCATCTTT
TGTTTATCGA TGCTCGGCGG CGCCTTCGTC GCACTGGGAG GACTATTTGC CACGGTGACC
ATCTCCGGCG CGGCGGGACA TCTGCCCTAT GGCGTGATGC GCCTGCTGAT GGGCGCCACC
TTCTCGCTGG GCTTGATGCT GGTGGTCATC GCCGGGGCAC AACTGTTCAC CAGCGATGCC
CTGATGGTCA TGGCCTGGGC CAGCGGCCGG CTGAAAACCG TCCGAATGTT GCGGGTATGG
ACAACCGTCT GGCTCGGCAA CTTCGTCGGC GCCCTGGGCG TCGCTGCCCT GGTATTTCTG
TCGGGGCAAT ACGCCTTTGG TCACGGAGAA GTCGGGGCCA GCGCGCTCTA CCTGGCGTCG
GCGAAAAGCA GCCTGGCGCC GGACAAGGCC TTCTTCCTCG GCATTCTGTG CAATGTCCTG
GTTTGTTTGG CCGCCTGGGT AGCCATGGCG GCACGCAGCA TCACCGACAA AATCCTGGCC
ATGTTCTTTC CGATTGCGGC CTTCGTCGCA GCCGGCTTCG AGCACTGCGT GGCCAACATG
TATTTCATTC CCTACGGCCT GTTCATCAAG TGGTGGGCGC CGCAATCCTT CTGGGAAGAC
CTGGCCCACC TTCAGATCGC ACCGGCAGAC ATACCGATTG ATCAGTTTGT GATCAATCTG
GCCGCAGTGA CGCTGGGTAA CTGGGTGGGT GGCGCATTGT TCGTCGGTGG CATTTACTGG
CTGATCTACC GGAAGGATGA CGGTGCAACG AAGGAGTGCA TTGCGGACTG A
 
Protein sequence
MLKKIDFGHD DHHADGGFKT APHAESIAAL SLDPLLPDAV ALAAEDVGVK KAKQKLWTIF 
CLSMLGGAFV ALGGLFATVT ISGAAGHLPY GVMRLLMGAT FSLGLMLVVI AGAQLFTSDA
LMVMAWASGR LKTVRMLRVW TTVWLGNFVG ALGVAALVFL SGQYAFGHGE VGASALYLAS
AKSSLAPDKA FFLGILCNVL VCLAAWVAMA ARSITDKILA MFFPIAAFVA AGFEHCVANM
YFIPYGLFIK WWAPQSFWED LAHLQIAPAD IPIDQFVINL AAVTLGNWVG GALFVGGIYW
LIYRKDDGAT KECIAD