Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2077 |
Symbol | |
ID | 3570199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2235555 |
End bp | 2235947 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637680551 |
Product | triple helix repeat-containing collagen |
Protein accession | YP_285291 |
Protein GI | 71907704 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 0.117574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTT TCGGCCGCAT ACGACTCAAG AGGAAAATCA TGAAAAAATC ACTCAGCACG CTATTGATCA TCGCCGCCTT CGGTTTGGGC GCCTGCACCG GACCGATGGG CCCGCAAGGC GAGCGCGGTA GCACCGGCAA TACCGGTAAC ACGGGCAATA CAGGCAGTAC CGGTAACACC GGCGCCAAGG GATCGACCGG CAATCAGGGT AATACCGGCT ACACCGGTGC CCAGGGTGAA ACCGGAACGC AAGGTTCGAC CGGTGCCGTT GGTGATACCG GGGCAACAGG AACCCAGGGC AGCACTGGCG CAACCGGCGC CAAGGGCAAG ACAGGCTCGA CCGGCGGCAC CACCAGTGGC AGCACGGTGA TCGTCGTCCC GCCGACACGC TGA
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Protein sequence | MQLFGRIRLK RKIMKKSLST LLIIAAFGLG ACTGPMGPQG ERGSTGNTGN TGNTGSTGNT GAKGSTGNQG NTGYTGAQGE TGTQGSTGAV GDTGATGTQG STGATGAKGK TGSTGGTTSG STVIVVPPTR
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