| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2048 |
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| Symbol | |
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| ID | 3567060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2208515 |
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| End bp | 2210998 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637680523 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_285263 |
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| Protein GI | 71907676 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.589876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATG CTGCGCTTCA CGTACTTCTG GTTGAAGACA ATTCGGACGA CGCCCGACTG
ATCGAAGCGG CACTGGATCA CCAAGGAGGG GCGACCTACC AGATCGATAA GGCTGCACGT
CTGTCTGAGG CCCTGAACTG TCTGGGCAAG GCGAATTTCG ATATCGTCCT GCTCGATCTC
AGTTTGCCTG ATGGACAAGG CATAGCAGTT TTCGAGCAGG TCTCCCGCCT GGCGGCCAAT
GCACTGATTC TCATCCTGAG TTCGGCCGAC GATGAAGAGG TGGCACGCCT GGCCGTACAG
AATGGCGCCG ACGATTACTT GGTCAAGGGC CTGGTCGATG CCCACTGGTT GCCGCGCACG
CTGCGCTACC TGATAGAGCG CAAGACAACA CGCCAGGCCC TGACTCTCAG CGAAGCCCGT
TTTCGTGCCA TGAGTGATGC CTCGCCGCTT GGCATCTTCG TCTCGGACAT CCACGGCGAA
TGCGTCTATA CCAACGCGGC CTATCACAAG ATATCGGGGC TGAATCTGGA ACAGACCCTG
GGCACCAACT GGAGCATGGC GATTCATCCC GATGATCGCC AGCGCGTCCT GCTCGAATGG
CGGGCAGCGG CGCTCGGCGA GGCAACATTT CAGACGGAAG CCAGGTTTCT GCGAGCCGAC
GGCAGTATCG TCTGGGCCCG CCTGAATGCG GCGGCCATGC TGGATGGCCT GCATCTGCGC
GGCCATGTTC AGACGGTGGA AGACATCAGC GAACGCAAGA TAACGGAGGA CGCCCTGTTC
GAGGAAAAGG AGCGCGCCCA GGTAACGCTC AATTCCATCG GCGACGCGGT ATTGACGACC
AATCTGAAGG GTGATGTGAC CTACCTGAAT CTTGTCGCCG AGATGATGAC CGGCTGGCCC
AGGGAGGCGG CTATCGGTCA GCCGCTGTCC GAGGTATTCA GAATTCTCAA CGGTACAACT
CGTGAGGTGG CGCCAAATCC AGCGCAGCTG GCCATTCGCG AGAATCGAAC GGTCGGGCTG
GCCGCGGACA GCATCCTTAT TCATCGCGAT GGTCTGGAAG CTGCTATCGA GGATTCGGCG
GCGCCGATTC ATAACCGGGA CGGCCAGGTG GCCGGTGCGG TCATTGTTTT TCACGACGTC
AGCGAGTCGC GGGCCATGGC GCTGAAGATG GCGCATCTGG CCCAACACGA TTTCCTGACC
GGCTTGCCGA ATCGGGCTTT GCTGACTGAG CGTCTTTCGC GAGCGATTGG CCAGGCGCGG
CGGCACAACA AGCGGGTCGG AATGTTGTTT CTCGACCTCG ACTATTTCAA GCATATCAAC
GACTCCCTTG GGCATGCCGT CGGCGACCAG TTACTGCAAC AGGTCGCCGA GCGTCTGATC
GTCTGCATCC GCGATACCGA CACGGTTTGC CGGCAGGGCG GGGATGAGTT CGTGATCCTG
CTTGCCGAGA TCGAGCAGGC GAGGGATGCC GCACCGATTG CTGAAAAACT TCTCGCCGCT
TTTGCCGAAC CCTGCCTGAT TGCCGGGAAT GAGCTTCACG TCTCCCTGAG CATCGGTATC
AGCATTTATC CCGATGATGG GATGGATGCC GATACCGTGA TGAAGAATGC CGATACCGCG
ATGTATCACG CCAAGGCCAA CGGCCGGAAC AATTACCAGT TTTTCACCAC CGAAATGAAT
ACCCGTGCCG TCCGGCGCCT GTTTATCGAA GGCAACCTGC GCCGTGCACT GCGCCAGGGC
GAGTTCATGC TCTATTACCA GCCCAAGATC GATCTGGCTT CAGGGATGAT GATCGGCAGC
GAAGCCCTGA TCCGCTGGCA GGACCCTGAA CATGGGCTGG TTTATCCCAA GCAGTTCGTG
CCGATCGCCG AAGAATCGGG TCTGATCGTC CCGATTGGCA GTTGGGTACT GCGCGAAGCC
TGCCGTCAGG TCCGTGCCTG GCAGGAATCC GGGCTGGTGG CCGTGCCCGT TTCAGTCAAC
ATTTCAGCCG TCGAGTTTCG CCACAAGGAC TTTCTCGAAG GGGTGGCACT GATCCTGAAG
GAAACCGGCA TGCTGCCCAG TTATCTCGAA CTGGAATTGA CCGAAAGCAT CCTGATGCAC
GATGCCGAAT CGTCGGCGAC GGTACTGGAA GCGCTGAAGA CGATGGGCAT GCAGCTGGCC
ATCGACGACT TTGGCACCGG CTATTCGAGC CTCAGCTATC TGAAGCGCTT TCCGATCAAT
ACACTGAAGA TCGACCAGTC GTTCGTTCAT GACATTGCGA TCGATCCGGA CGATGCCAGC
ATCGTCGGCG CCATGATCGG CATGGGCAAG AACCTCAAGC AGCGCGTCGT TGCAGAGGGC
GTGGAAACCG AGGAGCAACT GGCTTTCCTG CGCACGCTGC ATTGCGATGA AGGGCAGGGC
TTCCTGTTCG GCCGTCCTTT GCCGGCCGAT GAATTCGCCC GCCTGCTGCT CAATGACCGT
GGTTTTTCCG CCGACCTGAA CTGA
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| Protein sequence | MNDAALHVLL VEDNSDDARL IEAALDHQGG ATYQIDKAAR LSEALNCLGK ANFDIVLLDL
SLPDGQGIAV FEQVSRLAAN ALILILSSAD DEEVARLAVQ NGADDYLVKG LVDAHWLPRT
LRYLIERKTT RQALTLSEAR FRAMSDASPL GIFVSDIHGE CVYTNAAYHK ISGLNLEQTL
GTNWSMAIHP DDRQRVLLEW RAAALGEATF QTEARFLRAD GSIVWARLNA AAMLDGLHLR
GHVQTVEDIS ERKITEDALF EEKERAQVTL NSIGDAVLTT NLKGDVTYLN LVAEMMTGWP
REAAIGQPLS EVFRILNGTT REVAPNPAQL AIRENRTVGL AADSILIHRD GLEAAIEDSA
APIHNRDGQV AGAVIVFHDV SESRAMALKM AHLAQHDFLT GLPNRALLTE RLSRAIGQAR
RHNKRVGMLF LDLDYFKHIN DSLGHAVGDQ LLQQVAERLI VCIRDTDTVC RQGGDEFVIL
LAEIEQARDA APIAEKLLAA FAEPCLIAGN ELHVSLSIGI SIYPDDGMDA DTVMKNADTA
MYHAKANGRN NYQFFTTEMN TRAVRRLFIE GNLRRALRQG EFMLYYQPKI DLASGMMIGS
EALIRWQDPE HGLVYPKQFV PIAEESGLIV PIGSWVLREA CRQVRAWQES GLVAVPVSVN
ISAVEFRHKD FLEGVALILK ETGMLPSYLE LELTESILMH DAESSATVLE ALKTMGMQLA
IDDFGTGYSS LSYLKRFPIN TLKIDQSFVH DIAIDPDDAS IVGAMIGMGK NLKQRVVAEG
VETEEQLAFL RTLHCDEGQG FLFGRPLPAD EFARLLLNDR GFSADLN
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