Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2027 |
Symbol | |
ID | 3566974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2180236 |
End bp | 2181024 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637680498 |
Product | signal peptidase I |
Protein accession | YP_285242 |
Protein GI | 71907655 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 0.0626675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTTG CCCTGATTCT TTTTGTCCTG TTGGTTTTGA CCGGTATTCT TTATGCGGTC GACGTCCTGA AATTTCGGAA ATTACGTGCA AAGGATGCCA GAGAGCCATT GTGGGTCGAA TGGGGCGCCA GTTTCTTCCC CGTTATCCTG ATCGTCTTCG TGCTGCGTTC CTTTCTGTTT GAACCATTCA AGATTCCCTC AGGATCGATG ATCCCGACGC TGCTGGTGGG GGATTTCATT CTGGTTAACA AGTTCACCTA CGGTATCCGC TTGCCGGTGA TCAACAAAAA AGTGATCGAT TTCAATTCGC CACAGCGTGG TGACGTCATG GTCTTCCGTT ACCCCGAGGA TCCATCGCTG GACTACATCA AGCGAGTTGT GGGTTTGCCC GGTGATACCG TGGCTTACCA GAATAAAAAG CTGACTATCA ATGGGCAGTC TGTCGAAACA CAGAAAATTG GTGATTATCT GCATCCGGAG CGTCTGTATT ACTCCGAACA GTTTCTGGAA AAACTGGGTG AGGTAGAGCA TCGGGCGCTG AACGATACCG ATGCCCCGGC CTTCGTTGCA GATGCTGCAA GGTTTCCGCA TCGAGAAAAT TGTACTTACA ATGCGACGGG GGTGATTTGT AAAGTGCCTC TCGGTCACTA TTTCATGATG GGGGACAATC GGGACAACAG CCGAGATAGC CGCGCCTGGG GTTTTGTTCC CGAGGAAAAT ATTGTCGGCA AGGCATTCTT TATCTGGTTG AATTTCAGTG ATTTCAGCCG GATTGGCTCA TTCCGCTAA
|
Protein sequence | MNFALILFVL LVLTGILYAV DVLKFRKLRA KDAREPLWVE WGASFFPVIL IVFVLRSFLF EPFKIPSGSM IPTLLVGDFI LVNKFTYGIR LPVINKKVID FNSPQRGDVM VFRYPEDPSL DYIKRVVGLP GDTVAYQNKK LTINGQSVET QKIGDYLHPE RLYYSEQFLE KLGEVEHRAL NDTDAPAFVA DAARFPHREN CTYNATGVIC KVPLGHYFMM GDNRDNSRDS RAWGFVPEEN IVGKAFFIWL NFSDFSRIGS FR
|
| |