Gene Daro_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2027 
Symbol 
ID3566974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2180236 
End bp2181024 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content49% 
IMG OID637680498 
Productsignal peptidase I 
Protein accessionYP_285242 
Protein GI71907655 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.0626675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTG CCCTGATTCT TTTTGTCCTG TTGGTTTTGA CCGGTATTCT TTATGCGGTC 
GACGTCCTGA AATTTCGGAA ATTACGTGCA AAGGATGCCA GAGAGCCATT GTGGGTCGAA
TGGGGCGCCA GTTTCTTCCC CGTTATCCTG ATCGTCTTCG TGCTGCGTTC CTTTCTGTTT
GAACCATTCA AGATTCCCTC AGGATCGATG ATCCCGACGC TGCTGGTGGG GGATTTCATT
CTGGTTAACA AGTTCACCTA CGGTATCCGC TTGCCGGTGA TCAACAAAAA AGTGATCGAT
TTCAATTCGC CACAGCGTGG TGACGTCATG GTCTTCCGTT ACCCCGAGGA TCCATCGCTG
GACTACATCA AGCGAGTTGT GGGTTTGCCC GGTGATACCG TGGCTTACCA GAATAAAAAG
CTGACTATCA ATGGGCAGTC TGTCGAAACA CAGAAAATTG GTGATTATCT GCATCCGGAG
CGTCTGTATT ACTCCGAACA GTTTCTGGAA AAACTGGGTG AGGTAGAGCA TCGGGCGCTG
AACGATACCG ATGCCCCGGC CTTCGTTGCA GATGCTGCAA GGTTTCCGCA TCGAGAAAAT
TGTACTTACA ATGCGACGGG GGTGATTTGT AAAGTGCCTC TCGGTCACTA TTTCATGATG
GGGGACAATC GGGACAACAG CCGAGATAGC CGCGCCTGGG GTTTTGTTCC CGAGGAAAAT
ATTGTCGGCA AGGCATTCTT TATCTGGTTG AATTTCAGTG ATTTCAGCCG GATTGGCTCA
TTCCGCTAA
 
Protein sequence
MNFALILFVL LVLTGILYAV DVLKFRKLRA KDAREPLWVE WGASFFPVIL IVFVLRSFLF 
EPFKIPSGSM IPTLLVGDFI LVNKFTYGIR LPVINKKVID FNSPQRGDVM VFRYPEDPSL
DYIKRVVGLP GDTVAYQNKK LTINGQSVET QKIGDYLHPE RLYYSEQFLE KLGEVEHRAL
NDTDAPAFVA DAARFPHREN CTYNATGVIC KVPLGHYFMM GDNRDNSRDS RAWGFVPEEN
IVGKAFFIWL NFSDFSRIGS FR