| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2024 |
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| Symbol | |
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| ID | 3566971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2176721 |
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| End bp | 2178142 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637680495 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_285239 |
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| Protein GI | 71907652 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.115837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT TTGTGGCTCT GTGTTCTCTT TGCTTCTTGT GCTCACTGCC TGTTGTTGCC
CAGACGCGTG GCTTACCCGA TTTTTCCGAG TTGGCCGAAA AGCAGGGACC GGCAGTCGTC
AATATCAGCA CGACACAGAT CGTCCGCGGG CAGGCACAAA TGATGCCGTT CCCGTTTGAC
GAAAATGACC CTGCCTTCGA ATTCTTCAAG CGCTTCATTC CACGCAACCC AGGTGGCGCC
GTACCGCGTG ACTTCGAAAA CAAGTCACTC GGTTCCGGCT TCATTATCAG CGGTGATGGC
TATATCCTGA CGAACGCGCA CGTCGTTGAT GGGGCCGATG AAGTTGCGGT ACGCCTGACG
GACAAGCGTG AATTCAAGGC CAAGATCATC GGTGCAGACA AACGAACCGA TGTTGCGTTG
ATCAAGATTG AAGCTACCGG ACTTCCTGCT GCCAAGCTGG GTGATCCGGG CCAAATCAAG
GTAGGGGAAT GGGTGGTCGC CATTGGCTCG CCATTCGGGT TCGACAACTC GGTAACCGCT
GGTATTGTTT CCGCCAAGGG GCGCTCTCTG CCCCAGGAAA ACTACGTTCC TTTCATCCAG
ACCGATGTCG CGATTAACCC TGGTAATTCC GGCGGCCCAC TGTTCAATAT GCGTGGCGAA
GTGGTTGGTA TCAATTCGCA GATTTACAGC CGTAGTGGTG GCTACATGGG GGTTTCCTTC
GCCATTCCTA TCGATGTGGC GATGGACATC CAGAATCAGT TGCGCGCTTC CGGCAAGGTT
AGTCGTGGTC GCCTGGGGGT GGTGATTCAG GAGGTTAACA AGGAACTCGC CGATTCGCTG
GGCTTGACCA AACCGATTGG CGCTGTGGTG AACTCTGTGG AAAAGGGCGG GCCAGCTGAA
CGAGCCGGCA TAGAGGCTGG CGACGTAATC CTGAAATTTG ATGGCAAGAC GATCAACAAT
TCGGCTGACT TGCCACGCAT GGTGGGTGCA ACCAGGCCGG GTGGCCGCTC TGTAGTTCAG
GTTTGGCGCA AGGGGGCGAC ACGCGATATC GGTGTCACGA TAGGTGAGGT TCCTGATGAA
AAGCAGGCAA ATACAAAGGT GCCACGCGGG AAACTCTCTG AACAGACGGC CAATCGCCTC
GGTTTGGTCG TCAGCGAACT GACTCCTGAT CAAAAACGCG AGCTGAAAAT GAATTCCGGC
CTGCTAATCG AAGATGTTCG CGGGCAGGGG GCTCGTACCG ATCTGCGTGC TGGTGACATT
GTGATTGCAG TGATTGCGAA AGGTGCTACC ACTGAGGTCA AGACGGTGGA CCAGTTCAAT
AAGCTACTGG CTCAGTTTGA GAAAGGTAGT AACGTGACCC TGCTTGTTCG TCGTGGCGAA
ATGCAGACTT TCATCACCGT AAAAGGCTTG AACGGTGGTT GA
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| Protein sequence | MKRFVALCSL CFLCSLPVVA QTRGLPDFSE LAEKQGPAVV NISTTQIVRG QAQMMPFPFD
ENDPAFEFFK RFIPRNPGGA VPRDFENKSL GSGFIISGDG YILTNAHVVD GADEVAVRLT
DKREFKAKII GADKRTDVAL IKIEATGLPA AKLGDPGQIK VGEWVVAIGS PFGFDNSVTA
GIVSAKGRSL PQENYVPFIQ TDVAINPGNS GGPLFNMRGE VVGINSQIYS RSGGYMGVSF
AIPIDVAMDI QNQLRASGKV SRGRLGVVIQ EVNKELADSL GLTKPIGAVV NSVEKGGPAE
RAGIEAGDVI LKFDGKTINN SADLPRMVGA TRPGGRSVVQ VWRKGATRDI GVTIGEVPDE
KQANTKVPRG KLSEQTANRL GLVVSELTPD QKRELKMNSG LLIEDVRGQG ARTDLRAGDI
VIAVIAKGAT TEVKTVDQFN KLLAQFEKGS NVTLLVRRGE MQTFITVKGL NGG
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