| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2021 |
|---|
| Symbol | |
|---|
| ID | 3566968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2173910 |
|---|
| End bp | 2175487 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637680492 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_285236 |
|---|
| Protein GI | 71907649 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.00800394 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAAAT TTGATGTCCT GATCATCGGT AGCGGGCTTG CTGGCCAGTC TGCCGCATTG
AGACTCGCCC CTCATTGCCG AGTGGTACTC GTCAGCAAGC GTAGCCTTGA AGACTCCGCA
TCCGGCTGGG CTCAAGGGGG GATTGCTGCG GTACTGGACA GCCAGGATTC CATCGAAGCG
CATATTCGGG ATACGCTGAT TGCCGGCGCT TGGTTGAACG ACGAAAAAGC TACCCGCCAT
GTCGTTGAAA ACGGGCGCCG AGTTATCGAG TGGCTGATTG AACAAGGCGT CCCTTTCACC
AAAGACGACT CTGGCTACCA CCTTACCCGC GAAGGAGGCC ACAGTGCTCG CCGTGTTATC
CACGTTGCTG ACGCGACTGG TCTTGCCGTA CAGGACACGT TAACCAAGAA AGTTCGCGCC
AATCCAAACA TTACCGTTCT GGAAGATCAC ATCGCGATCG ACCTGATCAC GGGAGACAAG
CTCGGTCAAA ACGATAAGCG CTGCTATGGC GCCTACATTC TGAATAATCG TAATGGTGAA
GTGATCACCA TTGGCGCCCA GAACACCCTT ATCGCCACAG GCGGTGCCGG CAAGGTTTAT
CTCTATACGA CCAACCCCGA TACCTCCACA GGTGATGGCA TAGCCATGGC TTATCGTGCG
GGTTGCCGGG TATCGAACAT GGAATTTATC CAGTTTCACC CGACCTGTCT CTATCACCCC
CAGGCTAAAT CATTCCTTAT ATCTGAAGCA GTACGTGGCG AAGGCGGGCT ACTCCGCCTG
CCGGACGGAA CTCGCTTCAT GCCTGAGCAC GATGACCGCG CAGAACTGGC ACCGCGTGAC
ATCGTCGCTC GTGCCATCGA CTTCGAAATG AAGAAACGCG GCCTCGATTG TGTCTTCCTC
GATATTTCAC ACAAGGATGA AGCGTTCATT CGCGGTCATT TCCCGAATAT TTACGCTCGC
TGCCTGGAAC TGGGTATTGA TATCACCCAG GAAGCGATTC CTGTCGTGCC TGCTGCCCAC
TACACCTGCG GCGGTATTGT CAGCGATCTT CACGGCCGCA CCGATGTGTC AGGACTGTAC
GTCGCCGGTG AAGCCTCCTG CACCGGACTG CACGGTGCCA ACCGCCTTGC TTCCAACTCA
TTGCTTGAAT GCCTAGTGTT TGCCGAAGCA GCGGTTAACG ACATCTTGAG CAAGAAATCC
GAAAAAATCC CCACATTGCC GCGCTGGGAT GAAAGCCGGG TGACTGATGC CGATGAAGAA
GTGGTCATAT CCCATAACTG GGATGAGCTC CGTCGCTTCA TGTGGGATTA CGTCGGTATT
GTCCGAACGA CCAAACGACT GAAACGGGCA AAACATCGCA TTGGTTTGTT GATGCGGGAA
ATTGACGAGT TTTATGCCAA TTTCCGGGTT AGCCATGACC TTATTGAGTT ACGCAATTTG
GTAGTAACCG CGGACTTGAT CGTGCGCTGT GCCATGTTGC GCAAAGAAAG CCGGGGACTA
CATTTTTCCC GAGATTTTCC TGATATGGCC AGCAAGCCGA AGAACACGGT CCTCAAGCGT
CGCCGACAAG CGGGCTGA
|
|---|
| Protein sequence | MQKFDVLIIG SGLAGQSAAL RLAPHCRVVL VSKRSLEDSA SGWAQGGIAA VLDSQDSIEA
HIRDTLIAGA WLNDEKATRH VVENGRRVIE WLIEQGVPFT KDDSGYHLTR EGGHSARRVI
HVADATGLAV QDTLTKKVRA NPNITVLEDH IAIDLITGDK LGQNDKRCYG AYILNNRNGE
VITIGAQNTL IATGGAGKVY LYTTNPDTST GDGIAMAYRA GCRVSNMEFI QFHPTCLYHP
QAKSFLISEA VRGEGGLLRL PDGTRFMPEH DDRAELAPRD IVARAIDFEM KKRGLDCVFL
DISHKDEAFI RGHFPNIYAR CLELGIDITQ EAIPVVPAAH YTCGGIVSDL HGRTDVSGLY
VAGEASCTGL HGANRLASNS LLECLVFAEA AVNDILSKKS EKIPTLPRWD ESRVTDADEE
VVISHNWDEL RRFMWDYVGI VRTTKRLKRA KHRIGLLMRE IDEFYANFRV SHDLIELRNL
VVTADLIVRC AMLRKESRGL HFSRDFPDMA SKPKNTVLKR RRQAG
|
|---|
| |