Gene Daro_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2017 
Symbol 
ID3566964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2171104 
End bp2171850 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content56% 
IMG OID637680488 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_285232 
Protein GI71907645 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.0115083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGC TGACCGATAA AATTGCGCTG GTGACCGGTG CGACCCGGGG TATCGGGCGG 
GCTATTGCTC TGGAGCTTGG CAAGCAGGGG GCAACCGTGA TTGGTACTGC TACCAGTGAA
GAAGGTGCAG GAAAAATCTC CGCCTATCTT TTGGAAGCGG GTATCAAGGG CAAGGGAATT
GCGCTGAATG TCTGCGACGT AGCGCAGACG GATGCTGCCT TATCCGATAT CGCCAAGGAA
TTCGGTGCCA TAACCATTTT GGTTAATAAC GCTGGTATTA CTCGTGACAA TCTCACCATG
CGCATGGGTG ACGACGAGTG GGATGCTGTC ATTGATACGA ACCTGAAGGC GGTTTTCCGA
CTTTCCCGTG GCGTGATGCG GGGCATGATG AAGGCGCGTT TTGGCCGCAT CGTCAATATT
TCCTCGGTGG TTGGTTACTC CGGCAATGCT GGGCAGGCCA ACTACTGTGC AGCCAAGGCT
GGCGTGGCTG GCCTGAGTCG TTCGCTGGCT CGCGAATTAG GTAGCCGCAA CATCACTGTC
AATTGCGTTG CACCGGGTTT TATCGCCACT GACATGACGC ACGCCTTGAC CGAAGAGCAG
AAGGCAGCCA TGCTGGCGTC CATTCCGCTG GCTCGAGCCG GCACTCCGGA GGATATCGCC
GGTGCCGTGG GTTTTCTGGT TTCTCCCGCT GCCTCGTATG TCACGGGCAC TACCGTGCAT
GTGAATGGCG GCATGTTTAT GGATTGA
 
Protein sequence
MNMLTDKIAL VTGATRGIGR AIALELGKQG ATVIGTATSE EGAGKISAYL LEAGIKGKGI 
ALNVCDVAQT DAALSDIAKE FGAITILVNN AGITRDNLTM RMGDDEWDAV IDTNLKAVFR
LSRGVMRGMM KARFGRIVNI SSVVGYSGNA GQANYCAAKA GVAGLSRSLA RELGSRNITV
NCVAPGFIAT DMTHALTEEQ KAAMLASIPL ARAGTPEDIA GAVGFLVSPA ASYVTGTTVH
VNGGMFMD