Gene Daro_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2014 
Symbol 
ID3566961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2168185 
End bp2169204 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content54% 
IMG OID637680485 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_285229 
Protein GI71907642 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC GCATTGCCAT TGATTGCATG GGGGGTGACC ACGGTCCGTC TGTGACGGTA 
CCTGCGGCCA TTCAATTTCT TGCGGAGCAT CCGTCTGCTA ATCTCGTCCT GGTTGGTCAG
GAGGGGGTTT TGCGTCCGTT GCTCGGCAAT CATGCCAACG ATTCCCGCAT TCGCCTTCTC
CACGCCTCCG AAATCGTTGG TATGGATGAG TCGCCGGCGC TTGCCCTACG CAATAAAAAA
GATTCGTCTA TGCGGGTGGC TATTAATCAG GTCAAGGCTG GTGATGCCGA TGCCTGTGTT
TCAGCTGGCA ACACCGGTGC CTTGATGGCA ATCTCTCGCT TTGTATTGAA GATGCTCCCC
GGTATCGATC GCCCGGCTAT TTGTGCGCCG CTGCCAACCG TTAATGGCCA TACGCACATG
CTGGATCTTG GCGCGAACGT CGATTGTGGT CCGCACCATC TGCTCCAGTT TGGCATCATG
GGCGCCATGC TGGTTGCTGC GATGGAACAC AAGGATCAGC CGACCGTCGG TATCCTCAAT
ATTGGCGAAG AAGAAATCAA GGGCAATGAG GTGGTCAAGG CTGCTGCCGA GTTACTTAGG
GCTTCAGATC TTAACTTCAT CGGCAATGTC GAGGGTGATG GCATATATAA AGGCGAAGCT
GACGTCATCG TTTGCGACGG TTTCGTCGGA AATGTCGCCT TAAAAACCTC CGAGGGGCTG
GCCCAGATGC TGGCCTCCTC GCTGCGCAGC GAATTTAAGC GTAATTGGCT GACCAAGCTG
GCTGCCTTGA TTGCCATCTC AGTACTCAAT AATTTCAAAA AGCGCTTTGA CCATCGCCGT
TACAATGGTG CAATTCTTCT CGGACTCAAG GGTATTTCGG TCAAGAGCCA CGGCTCAGCC
GATATACTGG CTTTCGGGAA TGCCATTTCG CGCGCCTATG ATGCGGCAGA AAACCGGGTT
GTTGAACGCA TTTCTAGCCG AATAGCAGCG ATGATTCCTG CAGCCGTGGA GAACGTCTGA
 
Protein sequence
MTTRIAIDCM GGDHGPSVTV PAAIQFLAEH PSANLVLVGQ EGVLRPLLGN HANDSRIRLL 
HASEIVGMDE SPALALRNKK DSSMRVAINQ VKAGDADACV SAGNTGALMA ISRFVLKMLP
GIDRPAICAP LPTVNGHTHM LDLGANVDCG PHHLLQFGIM GAMLVAAMEH KDQPTVGILN
IGEEEIKGNE VVKAAAELLR ASDLNFIGNV EGDGIYKGEA DVIVCDGFVG NVALKTSEGL
AQMLASSLRS EFKRNWLTKL AALIAISVLN NFKKRFDHRR YNGAILLGLK GISVKSHGSA
DILAFGNAIS RAYDAAENRV VERISSRIAA MIPAAVENV