Gene Daro_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2010 
Symbol 
ID3566957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2166040 
End bp2166747 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content58% 
IMG OID637680481 
Producturoporphyrin-III C/tetrapyrrole methyltransferase 
Protein accessionYP_285225 
Protein GI71907638 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones81 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA CCCTCTATTT GATACCCGTC CCGCTTGGCC CAACCCCCCC CCAAGACTCA 
CTACCCCAGA ATGTCTTGGC AACCATTTGG CCGCTTAGCC ACTTTGTTGT TGAGCAAGCC
AAGACTGCCC GGGCTTTTCT GAAGGCGGCA GGCACCGAGA AGCCCCTGCA AGAGCTGCAG
CTTGAGGAGC TAAATGAGCA CACCCGAGCC GATGCCCTGG ATCGACTACT AGCACCTCTG
CACGCGGGTC ACGATGTCGG CCTGCTCTCC GAAGCCGGCT GCCCGGCAGT CGCCGACCCC
GGCGCCAATC TGGTTGCTTT AGCGCAGCAG AATAATATTC GTATCGTGCC GCTGATTGGC
CCTTCATCGC TATTGCTGGC ACTGATGGCA TCAGGCCTGA ACGGCCAACG TTTTGCCTTT
CAAGGCTACC TGCCAGCCAA GGATGGCGAT CGCTTGAAAG CACTGCGCGA CCTGGAGAGC
GAGTCACGGA AGCGTGTTCA AACGCAAATA TTCATTGAAA CGCCCTACCG GAATCGCGCC
ATGTTTGACG CAATTTTGCA GGCGTGTCAG CCGGCCACAC GCCTAACCGT GGCCACCGAC
CTATCTCTAC CCGGAGAATC GGTGCTAACA CGCACGATTC AGCAATGGAA AAAACAAACG
CCGCCCGAAA TCGAGCGGCG TCCGACAGTT TTTCTATTGC TGGCGTAG
 
Protein sequence
MAGTLYLIPV PLGPTPPQDS LPQNVLATIW PLSHFVVEQA KTARAFLKAA GTEKPLQELQ 
LEELNEHTRA DALDRLLAPL HAGHDVGLLS EAGCPAVADP GANLVALAQQ NNIRIVPLIG
PSSLLLALMA SGLNGQRFAF QGYLPAKDGD RLKALRDLES ESRKRVQTQI FIETPYRNRA
MFDAILQACQ PATRLTVATD LSLPGESVLT RTIQQWKKQT PPEIERRPTV FLLLA