| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2005 |
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| Symbol | |
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| ID | 3567721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2160082 |
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| End bp | 2162694 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637680477 |
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| Product | ribonuclease E |
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| Protein accession | YP_285221 |
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| Protein GI | 71907634 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TGCTATTCAA TGCGACACAG GCGGAAGAAC TCCGTGTCGC CATTGTCGAT
GGTCAAAAAC TGATTGACCT CGACATTGAA TCCGCCGCCA AGGAACAACG TAAAAGCAAC
ATCTACAAAG GGGTCATCAC CCGCATCGAA CCGTCGCTCG AAGCCTGCTT CGTCGACTAC
GGTGCTGACC GACACGGCTT CCTTCCCTTC AAGGAAGTCT CCCGCGCCTT CTTCCAGCCA
GGCACTGAAG TTGGTCGCGC CCGGATTCAG GATGCGCTGA AAGAAGGCCA GGAACTGATC
ATCCAGGTCG ACAAGGACGA ACGTGGCAAC AAGGGTGCCG CCCTAACCAC CTATGTCTCG
CTAGCCGGTC GCTATCTTGT TCTGATGCCG AACAACCCGC GCGGCGGTGG TGTTTCCCGC
CGCGTTGACG GCGATGAGCG CGCTGAACTG CGCGACGTCA TGGATCAGCT CGAAGTACCC
AACGGCATGA GCCTGATCGC CCGCACCGCA GCCATTGGCC GCCAGGCCGA AGAGCTGCAG
TGGGATTTGA ATTACCTGCT GCAACTGTGG ACCGCCATTG ACGGTGCCGC CCAGCAACAG
AGCGGCGCTT TCCTGATTTA TCTGGAAGGC AGCCTGGTTA TCCGCGCGAT TCGTGACTAT
TTCCAGCCCG ATATCGGCGA AATTCTGATC GACACCGACG AAGTCTATGA GCAGGCTCGC
GCCTTCATGG GCACGGTCAT GCCGGGCAAT ATCAATCGCG TCAAGCGCTA TCGCGATGAT
GTGCCACTGT TCTCGCGCTT CCAGATCGAA CACCAGATCG AAACCGCCTT CGCTCGCCAG
GTCAACCTGC CGTCCGGTGG CGCCATCGTT ATCGATCACA CTGAAGCGCT GGTCGCCGTC
GACGTCAACT CCGGTCGCGC CACCAAAGGT TCCGATATCG AAGAAACCGC ATTCAAGACG
AATCAGGAAG CAGCTGAAGA ACTGGCCCGC CAGTTGCGTC TGCGCGACTT GGGCGGCCTG
ATCGTGATCG ACTTCATCGA CATGGAAAAC CAGAAGAACC AGCGTGAAGT CGAAAACCGC
CTGCGCGATG CACTGCGTTT CGACCGTGCC CGAGTCCAAA TGGGCAAGAT CAGCCGCTTC
GGCCTGATGG AGCTATCCCG CCAGCGCCTG CGTCCGGCGC TTGCCGAAAC CAGCTACATC
CCCTGCCCGC GCTGCACCGG CACCGGCCAC ATCCGCTCCG CCGAATCGGC TGCCTTGCAC
ATCCTGCGCA TCCTTGAAGA AGAGGCGATG AAGGAAAATA CCGGCGCCGT GCATGTCCAA
GTTCCGGTTG ATGTCGCCAC CTTCCTGCTC AACGAAAAGC GCCCGGACAT CCAGGCCATC
GAGTTGCGTC ATAAGGTCAC CATTCTGTTG ATTCCGAATG TTCATCTCGA AACGCCGGCC
CACACCATTA CCCGCCTGCG CCACGATGAT CTGAACCAAG ACGATCTTCG CGAGCCATCC
TACAAGATGG TCGACATGCC GATCGAGGAA GCTATCAAGC AGGCAACCCA GGCGGAAGCC
GCCAAACCTC GTCAGGAAGC TGCGATCAAG GGTATTTCCC CTGATCAGCC CGCACCGATC
ATGCCGGAAA AGGCCGAAGC GCCGGTTGCC GCGCCTGCTC AGCCAGAAGG CGGCTTGTTC
TCGAAAATTT TCTCGTGGTT CCGCTCCTCA CCCAAACCGG TTGAACCGGT CGCAGCTCCG
GAGCCCGCCA AAAAGCCGCG CGAAGGTCGC GGGGATGGCC GTCGCGATGG TCGCCGCGGT
GGCCGAAATG GCAATCGTCG CGACGAAGAG CGCGGCGAAC GCAAGGAACG TCCTGAGCGC
AAGGAGCGCA ATGCAGTCGA CAAGGCTCCG CAAGACGGAA CACCGGCCTC GAACGGCGAA
CGCAAGGAAC GCCGTCCGCG TGGTGAACGC AAGGAGCGCG GCGAACGCCA GCAGCAAGCG
GAAACGGTTG AAAACAAGCT GGTTCAGCAA ACAGCAGCCG CCGATGCCGC CGTTGCTCCG
CTGCTGGCCA ACGAAGCCCC AGACGCACAG GGCAACGAAG AGCAAGGCAA TCGTCGTCGC
GGTCGTCGCG GTGGCAGAGG TCGTGGCGAG CGTCGCAACG AGGCTGACTC CACTCCGGTG
GCCGAGGTGC TACCAGTGAT TGAGCCGGCT GTTGAGCCAA TCAACCAAGA GCCGGTTGTC
GTTGTAATCC CTGCGGCCGA ACCGGTTGTT GTCGCAGCCG AAGTTGTCAC CCCGGTTGTT
GAACCAGTGG CCTCGCCCAT TGTTGAACCG GTTCAGGTTG CCGAAGTTAT TGAAGCTGCC
CCAGCTGCAA TCATCGAAGC GCTTCCGGTC GAAATTCAGG AAAGCCCGAA AGCCGAAGCA
CCTGCACCTG CTCCTGCTCC TGTCGTGGCA GAACCAGTCA ATCTTGAAGC GACACTCGCT
GAAAGCGGTT TGGTCATGGT TCAAACGACA TCTGCTGCAG TCGCTGCTGC CCAGCCAGAA
CCCCCGGTCA AACTGGGTCG TCCGCGCAAG GCGAAACCGG CAAGCAAGCA GGCTGAAAGC
GAATCGCTGG TCATGGTTGA AACCGCCAAA TAA
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| Protein sequence | MKRMLFNATQ AEELRVAIVD GQKLIDLDIE SAAKEQRKSN IYKGVITRIE PSLEACFVDY
GADRHGFLPF KEVSRAFFQP GTEVGRARIQ DALKEGQELI IQVDKDERGN KGAALTTYVS
LAGRYLVLMP NNPRGGGVSR RVDGDERAEL RDVMDQLEVP NGMSLIARTA AIGRQAEELQ
WDLNYLLQLW TAIDGAAQQQ SGAFLIYLEG SLVIRAIRDY FQPDIGEILI DTDEVYEQAR
AFMGTVMPGN INRVKRYRDD VPLFSRFQIE HQIETAFARQ VNLPSGGAIV IDHTEALVAV
DVNSGRATKG SDIEETAFKT NQEAAEELAR QLRLRDLGGL IVIDFIDMEN QKNQREVENR
LRDALRFDRA RVQMGKISRF GLMELSRQRL RPALAETSYI PCPRCTGTGH IRSAESAALH
ILRILEEEAM KENTGAVHVQ VPVDVATFLL NEKRPDIQAI ELRHKVTILL IPNVHLETPA
HTITRLRHDD LNQDDLREPS YKMVDMPIEE AIKQATQAEA AKPRQEAAIK GISPDQPAPI
MPEKAEAPVA APAQPEGGLF SKIFSWFRSS PKPVEPVAAP EPAKKPREGR GDGRRDGRRG
GRNGNRRDEE RGERKERPER KERNAVDKAP QDGTPASNGE RKERRPRGER KERGERQQQA
ETVENKLVQQ TAAADAAVAP LLANEAPDAQ GNEEQGNRRR GRRGGRGRGE RRNEADSTPV
AEVLPVIEPA VEPINQEPVV VVIPAAEPVV VAAEVVTPVV EPVASPIVEP VQVAEVIEAA
PAAIIEALPV EIQESPKAEA PAPAPAPVVA EPVNLEATLA ESGLVMVQTT SAAVAAAQPE
PPVKLGRPRK AKPASKQAES ESLVMVETAK
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