| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2003 |
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| Symbol | |
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| ID | 3567719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2157469 |
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| End bp | 2159541 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637680475 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_285219 |
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| Protein GI | 71907632 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.138887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA CCAACACCGG CACGCCTGTC GTCACCTTCG AGGGTAGCCC GTATCGATTG
CACCAACCCT TTCCGCCGGC GGGCGACCAG CCAGAGGCGA TTCGGCAACT CGTTGAGGGG
CTGGATGATG GCTTGTCCTT TCAGACCTTG CTTGGCGTGA CGGGCTCTGG CAAGACTTAC
ACGATGGCCA ATGTAATAGC TCGTACCGGC CGTCCTGCGC TGGTGCTAGC GCCCAATAAG
ACGCTGGCGG CGCAGTTGTA CTCGGAGTTC AAGGAGTTCT TCCCGGAGAA TTCTGTTGAG
TATTTTGTTT CCTACTACGA TTACTACCAG CCGGAGGCTT ACGTTCCATC CCGCGACTTG
TTCATTGAAA AAGATAGTTC GATCAATGAT CACATTGAGC AGATGCGCTT GTCGGCGACC
AAGAGCCTGA TTGAGCGACG GGATGTCGTC ATTGTCGCCA CGGTTTCCTG CATTTATGGC
ATTGGCGACC GAGACGAATA TCACAACATG ATCCTGACCA TGCGCGTCGG TGACAAGCTC
GATCAGCGCG CCATCGTCAA GCGCCTGACT GACATGCAGT ACGAGCGCAA CGAGATGGAT
TTTCACCGTG GCACCTTTCG GGTGCGCGGC GACATTATCG ACATCTTTCC AGCCGAGCAT
GCCGAGCACG CCATTCGCAT TTCCTTGTTC GACGACGAAG TTGAAGGGAT GCAGTTCTTT
GATCCCTTAA CGGGCCATCT GCTGCACAAG GCGCTCCGCT TTACGGTTTT CCCTGCGTCT
CACTACGTGA CGCCGCGTGC GACGGTGCTG CGCGCCGTTG AGGCAATCAA GGATGAATTG
CGCGAACGTA TTGATTTCTT CACTCGCAAC AACAAGTTGG TTGAAGCGCA GCGCATTGAA
CAGCGCACCC GCTTTGATCT CGAAATGCTT GATCAGATCG GCTTCTGCAA GGGTATCGAA
AATTATTCCC GACATTTTTC CGGGCGCAAG GCAGGAGAGT CGCCGCCTAC ATTGATTGAC
TATCTGCCAC CCGATGCGCT GATGTTCATT GATGAGTCGC ACGTCTCCAT TGGTCAGGTC
GGTGGTATGT ACAAGGGCGA CCGCTCGCGG AAGGAAAACC TGGTTGATTA CGGCTTTCGC
CTGCCGTCGG CGCTGGATAA CCGGCCGCTG CAATTTAATG AATTCGAGGC GCACATGCGT
CAGACAATCT TTGTTTCCGC GACGCCTGCC GATTATGAGC AACAGCATGC CGGTCAGGTT
GTGGAGCAGG TGGCGAGACC GACCGGGCTA ATCGATCCAG AAGTCATTGT GCGCCCGGCG
TCGACGCAGG TGGACGATCT GCTGGCTGAG ATCGGCAAGC GAATTGCCGT CGGTGAGCGG
GTGTTGGTCA CTACGCTAAC CAAGCGCATG TCCGAGGATC TGACCGATTT CCTGGCTGAT
AACGGCATCA AGGTTCGCTA TCTGCATTCG GACATCGATA CGGTCGAGCG CGTCGAAATC
ATTCGCGACC TTCGCCTCGG CGAGTTTGAC GTGCTGGTTG GTATCAATCT GCTACGCGAA
GGGTTGGATA TTCCTGAAGT TTCGCTGGTC GCAATTCTCG ATGCGGACAA AGAGGGATTT
CTGCGCTCCG AGCGCTCCCT GATTCAAACA ATTGGACGGG CGGCCCGCCA TATCCATGGC
ACGGCCATCC TCTATGCTGA TACAGTTACG CAATCCATGC AGCGTGCGAT TGCCGAAACA
GGGAGGCGGC GAGAGAAGCA GATTGCCTTT AACCTGGAAC ACGGAATTAC ACCGCGCGGG
GTGTCCAAGA AGATCAAGGA CATCATTGAC GGTGTGTATG ACGCAGGCTC TGCCCAGACG
GAATTGAAGG CAGCGCAGCA GCGGGCAGCA TACGATGCGA TGGATGAAAA AGCAGTAGCC
AGGGAAATCA AGCGACTCGA AAAATCAATG ATGGAGTGCG CGAAAAACCT GGAATTCGAA
AAAGCGGCGG CGGCCCGCGA CGATCTGTTC CGACTCAGGG AACGAGTTTT CGGCGCGGCT
CAGCACGACC TCGACGGAGA TGGGACAAAA TGA
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| Protein sequence | MSETNTGTPV VTFEGSPYRL HQPFPPAGDQ PEAIRQLVEG LDDGLSFQTL LGVTGSGKTY
TMANVIARTG RPALVLAPNK TLAAQLYSEF KEFFPENSVE YFVSYYDYYQ PEAYVPSRDL
FIEKDSSIND HIEQMRLSAT KSLIERRDVV IVATVSCIYG IGDRDEYHNM ILTMRVGDKL
DQRAIVKRLT DMQYERNEMD FHRGTFRVRG DIIDIFPAEH AEHAIRISLF DDEVEGMQFF
DPLTGHLLHK ALRFTVFPAS HYVTPRATVL RAVEAIKDEL RERIDFFTRN NKLVEAQRIE
QRTRFDLEML DQIGFCKGIE NYSRHFSGRK AGESPPTLID YLPPDALMFI DESHVSIGQV
GGMYKGDRSR KENLVDYGFR LPSALDNRPL QFNEFEAHMR QTIFVSATPA DYEQQHAGQV
VEQVARPTGL IDPEVIVRPA STQVDDLLAE IGKRIAVGER VLVTTLTKRM SEDLTDFLAD
NGIKVRYLHS DIDTVERVEI IRDLRLGEFD VLVGINLLRE GLDIPEVSLV AILDADKEGF
LRSERSLIQT IGRAARHIHG TAILYADTVT QSMQRAIAET GRRREKQIAF NLEHGITPRG
VSKKIKDIID GVYDAGSAQT ELKAAQQRAA YDAMDEKAVA REIKRLEKSM MECAKNLEFE
KAAAARDDLF RLRERVFGAA QHDLDGDGTK
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