Gene Daro_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1996 
Symbol 
ID3567711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2147274 
End bp2149496 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content59% 
IMG OID637680467 
Productradical SAM family protein 
Protein accessionYP_285212 
Protein GI71907625 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.578599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAA ATCAGCAAGT CGCGCGTCCG CTTTTCAGCC ACCGCAAATT CTGGGCACAC 
CGCTTCGGTC CGGCCCCTTT CCTCCCAATG TCACGTGCCG AGATGGATGC ACTGGGCTGG
GATTCCTGCG ACGTCATCCT GGTTACTGGG GATGCCTATA TCGACCATCC GAGCTTCGGC
ATGGCGCTGA TCGGCCGATT GCTCGAAGCG CAGGGCTTTC GGGTCGGTAT TCTGGTCCAG
CCGGATTGGA ACTCTGCAGC CGATTTCAAG AAACTGGGGA AGCCTAACCT GTATTTTGGT
GTCACAGCCG GCAATATGGA TTCGATGGTC AACCGTTACA CGGCTGACCG CAAGATTCGT
ACGGACGATG CCTACACGCC CAATGCCGAG CCTAACAAGC GGCCCGACCG TGCCGTCACT
GTATATGCGC AGCGCTGCCG TGAGGCCTTT CCCGGTACGG CGGTGATTGT CGGCTCGATT
GAAGCCAGTC TGCGCCGCAT TGCCCACTAC GATTACTGGT CGGACAAGGT ACGGCGCTCG
GTGCTGCCTG ACTCCAAGGC AGATCTGCTG ATTTTTGGCA ATGCCGAGCG CGCCATCGTT
GAGGTGACGC ACCGTCTGGC CAAGGGCGAA AAAATTTCCG AAATCCGCGA TCTGCGCGGT
ACCGCCTTCA TGGTGTCGCC GAACTGGCTG CCTTCGGAGG ACTGGGATGT GATGGACTCG
ACTGAAGTCG ACACGCCGGG GCCGCTGGTC AAGCATGCCG ACCCATACGC GATGGATACA
GGGGGAAGCT CAACTGCAGC CCCGGCGACA CCTGGTGAGC AACCCATCCG CATCGTTTCT
CTGGCCCAGC GCTTGGCTGC CCGCAAAGAA CGCCGCGCCC ATACCGTGAT TCGCTTGCCG
TCCTACGAGC AGGTCAAGGC CGATCCGGTG CTCTACGCGC ATGCTTCGCG CACTTTTCAC
CTTGAGTCCA ACCCCGGCAA TGCGCGAGCC CTGCGACAGG CACATGGCGA ACGCGATGTC
TGGCTGAATC CGCCGCCGTT CCCGCTGAGC ACCGAAGAGC TGGACCAAGT CTACGAACTG
CCCTATGCCC GTCGCCCGCA TCCGAGTTAC GGTGATGCCA AGATTCCTGC CTGGGAGATG
ATCCGTTTCT CGGTGAATAT CATGCGTGGC TGCTTTGGTG GCTGTACGTT TTGTTCGATT
ACCGAGCATG AAGGGCGCAT CATCCAGAGC CGCTCGGAAG ACTCGGTTAT CCGCGAGATC
GAGGAAATGC GCGACAAGAC GCCGGGCTTC ACCGGCGTCG TCTCCGATCT CGGCGGCCCG
ACCGCCAACA TGTTCCACCT GAAGTGCAAG GATGAAAAAA TCGAGTCGGC CTGTCGTCGG
CTTTCCTGTG TCTATCCGGA CATCTGCGAG AACATGAATA CTGATCACTC GCAGTTGATC
TCGCTGTATC GTCGGGCGCG CAGCATCAAG GGCGTCAAGA AGGTGCAGAT TGGCTCAGGC
CTGCGCTACG ACCTTGCCGT GCGCTCCCCG GAGTACATCA AGGAACTGGT CACCCATCAT
GTTGGCGGCT ACCTGAAAAT TGCTCCCGAA CATACAGAGG AGGGCGTGCT CTCCAAGATG
ATGAAGCCGG GCATCGGATC CTATGACCGC TTCAAGCAAC TGTTCGACCG TTTCTCACGC
GAAGCTGGCA AGGAGCAGTA CCTGATTCCG TACTTTATTG CCGCCCATCC GGGAACAACT
GACGAAGACA TGCTGAACCT GGCCTTGTGG CTGAAGAAGA ACAATTTTCG CCTCGATCAG
GTACAGACCT TCATTCCGAC GCCGATGGCA TTGGCAACGA CGATGTATCA CACCGAGCGC
AACCCGCTGC GCAAGGTCAA TCGCAGCAGC GAACATGTCG GTGCGGTGCG TAATGGCCGG
CAGCGCAAGC TGCAAAAGGC TTTCCTGCGC TATCACGATC CAGCCAACTG GCCGATGTTG
CGCGAAGCGC TCAAGGAAAT GGGCCGGGCC GACCTGATCG GTAATGGCAA GAAACAGCTG
ATTCCGGCAT GGCAGCCGGC CGGTGTCCCC GGCAAGTCCT GCGGCCAACC AGAAAAAGCG
GGGCAGATAA AAAAGGCTGG GTCGACACGT CGGGTGGAGC AGGCTCGTCC GGGACGGCCC
GGCGTCAAGC CCACAGCCTT CAATAAAGGA GGAGCCGGGG CTCGCAAGAA CCGGCCATCC
TGA
 
Protein sequence
MDSNQQVARP LFSHRKFWAH RFGPAPFLPM SRAEMDALGW DSCDVILVTG DAYIDHPSFG 
MALIGRLLEA QGFRVGILVQ PDWNSAADFK KLGKPNLYFG VTAGNMDSMV NRYTADRKIR
TDDAYTPNAE PNKRPDRAVT VYAQRCREAF PGTAVIVGSI EASLRRIAHY DYWSDKVRRS
VLPDSKADLL IFGNAERAIV EVTHRLAKGE KISEIRDLRG TAFMVSPNWL PSEDWDVMDS
TEVDTPGPLV KHADPYAMDT GGSSTAAPAT PGEQPIRIVS LAQRLAARKE RRAHTVIRLP
SYEQVKADPV LYAHASRTFH LESNPGNARA LRQAHGERDV WLNPPPFPLS TEELDQVYEL
PYARRPHPSY GDAKIPAWEM IRFSVNIMRG CFGGCTFCSI TEHEGRIIQS RSEDSVIREI
EEMRDKTPGF TGVVSDLGGP TANMFHLKCK DEKIESACRR LSCVYPDICE NMNTDHSQLI
SLYRRARSIK GVKKVQIGSG LRYDLAVRSP EYIKELVTHH VGGYLKIAPE HTEEGVLSKM
MKPGIGSYDR FKQLFDRFSR EAGKEQYLIP YFIAAHPGTT DEDMLNLALW LKKNNFRLDQ
VQTFIPTPMA LATTMYHTER NPLRKVNRSS EHVGAVRNGR QRKLQKAFLR YHDPANWPML
REALKEMGRA DLIGNGKKQL IPAWQPAGVP GKSCGQPEKA GQIKKAGSTR RVEQARPGRP
GVKPTAFNKG GAGARKNRPS