Gene Daro_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1995 
Symbol 
ID3567710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2146850 
End bp2147197 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content56% 
IMG OID637680466 
Productanti-anti-sigma regulatory factor, SpoIIAA 
Protein accessionYP_285211 
Protein GI71907624 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value0.400716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCC CCACACGCGA ACAGGCTGGT GTCCTGATTG TTTCGGTCAG CGGCCGCATA 
GACCACAATG CGAGCGAAGA GTTCACTAAA GCTCTTGAAC CTTTGCTTGA TCGCTGTGCC
AAGGGCTGCC CGGCGCTCCT GTTAGATTTC TCCGGTGTCG ACTACATCAG CAGCGCTGGG
CTACGCGTCC TGATGCTGGC CTCCCGCCGT TCTAAGGTAC AACAAGGTGT TTTTGCGATC
GCTGCTCTGC AGCCGATGGT TCAGGAGGTT TTTGCGATCA GCCGCTTTAA CCTGATCGTC
CCCTGCTACA TTTCTGTAGA TGCTGCCTGC CGGGTCATTG GCGCATGA
 
Protein sequence
MNLPTREQAG VLIVSVSGRI DHNASEEFTK ALEPLLDRCA KGCPALLLDF SGVDYISSAG 
LRVLMLASRR SKVQQGVFAI AALQPMVQEV FAISRFNLIV PCYISVDAAC RVIGA