| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1989 |
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| Symbol | |
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| ID | 3570238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2139840 |
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| End bp | 2142323 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637680460 |
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| Product | hypothetical protein |
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| Protein accession | YP_285205 |
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| Protein GI | 71907618 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.662339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.457189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTTG CCTGGCGATT GCTGGGCAGG GAGTTGCGCT CCGGCGAATT GCGCCTGCTT
TTTGCGGCGC TGGCCATCGC CGTCGCTGCC GTGACGGCGG TCGGCTTCTT CGCCGACCGA
GTTCGCCAGG GCTTGCAGCG CGAGGCCCGA CAAATGATGG GCGGCGATCT CGTCCTTATC
TCCGACCACC CGTTGCCCGA TAGCTACCTT GCCGAGGCTC GCCGGCGCGG GCTGCAGCTA
GCTCAAACGC TGGTTTTTCC CAGCATGGTG ATTGGCAAGA CACAGGCACA GCTTGCCGAT
ATCAAGGCAG TCAGCAGCGC CTATCCGTTA CGCGGCAAGC TGGCGAGCAG TCAGCGCGCC
GGCGATGGCG GCTTGCCCGT GGACAAAGGA CCGATGCCAG GAACAGTCTG GCTCGATGAA
CGGCTGTCAT CGTCCCTGGA GGTATTGCCT GGTGATGCCG TCACTGTCGG CAGTCAGCAA
TTCAGGGTTG GGGCTATCCT GACCCGGGAG CCTGATCGCG GAGTCAATTT CTTCAGCCTC
GCGCCGCGCC TGATGATGCA TGTCGACGAT ATTCCGGCCA CCGGCTTGGT CCAGTTCGGG
GCGCGGGTTC GCTATAACCT GCTGGCGGCC GGCGAGGAAA AGACCATCGC CAGCTATCAA
GGCTGGCTCC TGCCCCGGCT TTCGCACGGC GAACGGCTGG AAGATGCGCG TAATTCGCGC
CCTGAAATCC GCAATGCGCT GGATCGGGCC GAACGTTTTC TTGGCCTGGC TACCTTGCTG
ACGGTCGTGC TTTCGGCCGT TGCCGCAGCG CTGGCCGCTC GGCGCTATAT GCAACGCCAC
CTCGATGCGT GCGCCGTGAT GCGTTGCCTG GGCATGACGC ATGGACGCCT GCTGGGCTTC
CATGCCTCGC TATTCCTTTG GCTGGCCTTG CTGGCTGGTA TGCTGGGCAG CCTGCTCGGC
TATGCGGCTC ATTTTGTCCT GATTCGTTGG CTCACCGAAT TGTTGTCCCT TGAGTTGCCG
AATCCTGGCT GGTCTCCACT GGTCAGTGCC TTTGGCGTTG CCGGCGTGCT GCTTTTTGGG
TTTGCTTTTC CGCCGTTGCT GCAGTTAGCC AGAGTGCCGA CCCTGCGTGT TCTGCGCCGG
GAGCTTGGGC CGCCACAGCC ATTCCTGCTT GGCGGTTACG TGCTTGGCCT CGTCTTGCTC
GCCGGGTTGA TCATCTGGGT GGCGGGGGAT GCCAAGCTGG GGGGGCTGGC CGTCGGTGGT
TTTGCCGGGG CGCTCGGCGG GGTCTGGGTT CTTGCCAGGC TGCTTATCGG CGCCATTTCC
CGCCTGCGTG GTGGTGGCGG CTTCGGGTGG CGGCAAGGTT TGGCCAGTTT GACGCGACAT
GCTTCATCTG GCGCCATCCA AGTGGTCGCC TTGGCGATCG GCTTGATGGC CATGCTGTTG
CTGACGGTTA TTCGCGGAGA ACTGCTCGAC GCCTGGCAGA AATCGCTCCC GCTCGATGCG
CCGAATCGTT TCGTCATTAA CATTCAGCCG GAGCAGCGCG AGGATGTTTT GGCCATGTTG
ACCGCCAGCG GGATCAAGGC CGAATTGTTG CCCATGATAC GTGCCAGGCT GGTGCAAATC
GGCGGCAAGG CGGTCAGTCC GGACAGCTTT CCTGACGATG AGCGCGCCCA GCGCCTGATT
GAGCGGGAGT TCAATCTTTC GTGGCGAAAG GAACTGCCGG ACGGCAATCA AGTGATCGCC
GGTCAATGGT TCAGGCCAGA TCAGGCGGGG CAGGGCCTGG CTTCGGTTGA AGAGGGGCTG
GCCAAGACGC TCGGCATCCG AAACGGTGAC GAATTGGTCT TCATGATTGC CGGTAGCGAA
AAACGATTGC GGGTGACCAG CTTGCGCAAA TTGGCCTGGG ATTCGATGCG GGTCAATTTC
TTCGTCATGG CCCCGCCCGG TGTGATCGAA AATGCGCCGG CCAGCTACAT CACCAGCTTC
TACCTCTCTG CCAGTCAGAC AGCGGCGGGC TCCGATCTGG TCAGACGATT TCCCAATCTG
ACACTGATCG ACGTTGCGGC CGTCCTCCAG CAATTGCAAT CGGTGATTGG GCAGGTGGCT
GGTGCGGTGC AGTTCGTTTT CATTTTTACG CTGCTGGCCG GAGGGGTCGT GCTGTATTCG
GCCCTGCTGA CAGCTTTCGA CGAGCGCCGT TACGAGTTGG CTGTAATGCG AGCCCTCGGC
GCCCAGCGCC AACAGCTGAC GCAGGCGATG ATGGTTGAAC TGGCGGCCAT CGGTGGCATG
GCCGGTCTGT TCGCCGCCAT GGGGGCCATG GTGCTCGGGC GCATTGTGGG CTGGCAGGTA
TTCCAGCTGG ACCTGGCCTT CGGATACAGC CTGCTCCCTC TGACGATGGC TGGCGGCGCC
CTGGTCACTG TGGCCATCGG CTGGCTGGCC GTGCGTCGTC TGGTCATGAC GGCGCCCTTG
CTGGTTTTGC GGAGCGCTGC CTAA
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| Protein sequence | MMLAWRLLGR ELRSGELRLL FAALAIAVAA VTAVGFFADR VRQGLQREAR QMMGGDLVLI
SDHPLPDSYL AEARRRGLQL AQTLVFPSMV IGKTQAQLAD IKAVSSAYPL RGKLASSQRA
GDGGLPVDKG PMPGTVWLDE RLSSSLEVLP GDAVTVGSQQ FRVGAILTRE PDRGVNFFSL
APRLMMHVDD IPATGLVQFG ARVRYNLLAA GEEKTIASYQ GWLLPRLSHG ERLEDARNSR
PEIRNALDRA ERFLGLATLL TVVLSAVAAA LAARRYMQRH LDACAVMRCL GMTHGRLLGF
HASLFLWLAL LAGMLGSLLG YAAHFVLIRW LTELLSLELP NPGWSPLVSA FGVAGVLLFG
FAFPPLLQLA RVPTLRVLRR ELGPPQPFLL GGYVLGLVLL AGLIIWVAGD AKLGGLAVGG
FAGALGGVWV LARLLIGAIS RLRGGGGFGW RQGLASLTRH ASSGAIQVVA LAIGLMAMLL
LTVIRGELLD AWQKSLPLDA PNRFVINIQP EQREDVLAML TASGIKAELL PMIRARLVQI
GGKAVSPDSF PDDERAQRLI EREFNLSWRK ELPDGNQVIA GQWFRPDQAG QGLASVEEGL
AKTLGIRNGD ELVFMIAGSE KRLRVTSLRK LAWDSMRVNF FVMAPPGVIE NAPASYITSF
YLSASQTAAG SDLVRRFPNL TLIDVAAVLQ QLQSVIGQVA GAVQFVFIFT LLAGGVVLYS
ALLTAFDERR YELAVMRALG AQRQQLTQAM MVELAAIGGM AGLFAAMGAM VLGRIVGWQV
FQLDLAFGYS LLPLTMAGGA LVTVAIGWLA VRRLVMTAPL LVLRSAA
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