Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1987 |
Symbol | |
ID | 3570236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2136368 |
End bp | 2137729 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637680458 |
Product | DNA repair protein RadA |
Protein accession | YP_285203 |
Protein GI | 71907616 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.355792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG TCAAAACCAT CTACTCATGT ACCGAGTGCG GGGCAACCAG TCCGAAGTGG CAGGGGCAGT GCCCCGGTTG CAATGAGTGG AATACGCTGG TCGAAACTGT CGCCGAAAAG GCGGCAACCA ACAGTCGTTT CGAGTCACTG GCGCCGACGG CAAGGTTGCA GAACCTGTCG GAAATCGAAG CACGTGAAGT CGAGCGGATC GCCACCGGCA TCGGTGAATT CGATCGTGCC CTGGGCGGCG GTCTGGTCAA TGGTGCCGTG GTACTGATTG GCGGCGATCC GGGAATTGGC AAGAGCACCC TGCTGCTGCA GGCTTTGGCG CATCTGTCGC TCGATAACAA GGTGCTTTAC GTCAGCGGCG AGGAGTCGGG CGAACAGGTC GCCCTACGGG CTCGTCGTCT GGGCCTGGAT ACTCGCCGGC TGCAATTGAT GGCCGAGATC AACCTCGAAC GGATTCTCGC CACTTTGCAG GCGGAAAAGC CTGTCGTGGC GGTGATCGAC TCGATCCAGA CGTTGTGGTC CGATCAACTC TCCAGTGCTC CGGGATCGGT GGCGCAGGTC CGGGAATGCG CGGCACAATT GACTCGGTTA GCCAAGCAGG CCGGCATCAC GGTCATCCTG GTCGGCCATG TGACCAAGGA GGGGGCCTTG GCCGGGCCGC GCGTGCTTGA ACATATTGTC GATACCGTGC TTTATTTCGA GGGGGATACG CATTCCAGCT TCCGACTGGT GCGGGCCGTC AAAAACCGCT TTGGCGCCGT CAACGAGCTG GGTGTTTTTG CCATGACGGA CAAGGGGCTG AAGGGAGTCA ACAACCCCTC AGCCTTGTTC CTGTCCCAGC ACGGTCAGGA TGTGGCTGGT TCCTGTGTGA TGGTGACGCA GGAGGGAACA CGGCCCTTAC TGGTCGAGAT TCAGGCGCTG GTCGATACCT CGCACGGCAA CCCGCGGCGT CTGACGGTTG GCCTCGATCC GCAGCGACTG GCCATGTTGC TGGCCGTTTT GCATCGACAT GCCGGGATTG TTTGTTTCGA TCAGGATGTG TTCGTCAACG CGGTTGGTGG CGTCAAGATT ACTGAGCCTG CCGCCGATTT GGCAGTGCTT CTTTCGATAA CATCATCTTT AAAAAACAAA GCATTGCCAT CTAAACTTAT TGTATTTGGT GAAGTTGGTT TGGCCGGGGA GATCCGCCCG GCACCGCGTG GGCAGGAGCG TTTGAAGGAG GCCGCCAAGC TCGGCTTTAC CCGCGCCCTG ATCCCGGAGG CAAATCGTCC GAAACAGGCG ATTCCCGGCA TGGAAGTTAT TGCGGTAAAA CGAGTCGAGG AGGCGGTAGC GCGGATACGC GAGATGGAAT AA
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Protein sequence | MAKVKTIYSC TECGATSPKW QGQCPGCNEW NTLVETVAEK AATNSRFESL APTARLQNLS EIEAREVERI ATGIGEFDRA LGGGLVNGAV VLIGGDPGIG KSTLLLQALA HLSLDNKVLY VSGEESGEQV ALRARRLGLD TRRLQLMAEI NLERILATLQ AEKPVVAVID SIQTLWSDQL SSAPGSVAQV RECAAQLTRL AKQAGITVIL VGHVTKEGAL AGPRVLEHIV DTVLYFEGDT HSSFRLVRAV KNRFGAVNEL GVFAMTDKGL KGVNNPSALF LSQHGQDVAG SCVMVTQEGT RPLLVEIQAL VDTSHGNPRR LTVGLDPQRL AMLLAVLHRH AGIVCFDQDV FVNAVGGVKI TEPAADLAVL LSITSSLKNK ALPSKLIVFG EVGLAGEIRP APRGQERLKE AAKLGFTRAL IPEANRPKQA IPGMEVIAVK RVEEAVARIR EME
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