Gene Daro_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1979 
Symbol 
ID3570228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2128381 
End bp2129682 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content62% 
IMG OID637680450 
Productsensor histidine kinase 
Protein accessionYP_285195 
Protein GI71907608 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.690956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCA CGCTGCTGGC GCGCACCTTC CTGCTGTTGG CCATGCTGGT GCTGCTGACC 
ACGGCGGCCT GGCTGAGCCT GTTCCGCTAT ATCGACGCCG AGCCACGCGC CCGGGAAACC
GCCAAGTTGG CGGCTTCGGC CGTCAATCTG ATCCGCGCCT CACTGTTTGC CGCCGCGCCG
GAAAAACGCC TGGGTCTGTT TACCGAGTTT TCAACCCGCG AGGGCATCCG TCTGCTACCG
GCCGAACCTG AAGACGAGAT CGAGGCGATG CCCGATTCAC GCTTTTTTCG GCTGTTGCAG
CGCGAACTTC TTTCCCGACT GGGCGACCAC ACCCGTGTCG CGGCCAGTGT TGATGGCATT
CCCGGATTCT GGGTCAGCTT CCGGCTCGAC GATGCTGACG AAGAAGAGTA CTGGCTGGTC
CTGCCTCGTG ATCGTACCGC CAGGAGTATC GCCAGCCATT GGCTGGCCTG GGGGCTGCTC
GCCATCGTCC TGGCCATGGC AGTCGCGTGG CTGATCGCCT CGCGCATCAG CCGACCACTG
AAAGCGATGG CCAAGTCGGC TGAAACCCTT GGCCGCGGCC AGATACCGGA CCCTTTGCCG
GAAGATGGCA CCGAAGAACT CAGCCGGCTG GCGACTGCAT TCAATACCAT GGCCGCCGAT
CTTCAACGCC ATGAAAAAGA CCGTTCCGAA GTGCTGGCCG GTATCTCCCA CGATCTACGC
ACGCCGCTGA CCCGCCTGCG CCTGGAAGCC GAAATGAGCG TTGCCGATGA TGGTGCCCGG
CAAGCGGTCG TGACCGACAT CGAGCAGATG GAGGCGGTCA TTTCCCAGTT CATGGACTAC
GCCCGCGCCG AATCCGGTGA GGCCCCCACC CTGACCGACC TGTCAGCCCT GCTTGCAAGC
CTTGCCGAAC GCCAGGCCTA TATCGGCCGG CAGATCGTCA CCGACATCCA GGCATTGCCG
GAAGCGATGC TCCGCCCGAA AGCAGTCACC CGTGCCATCA ACAATCTGCT GGATAACGCG
GCAAAATATG GCGGCGGAGA TATCACCTTG AAAGCAGCCA CGATCAATGG CGAAATTCAA
ATAGACGTTG GTGATCATGG ACCGGGTGTT CCGCCTGATG ACATCGAACG ACTGAAGCGC
CCGTTTACTC GCCTGGAAGC TGCCAGAACC AATGCCACAG GAACCGGCCT GGGACTGGCC
ATTGTCGAGC GCATCGCCCG CCTGCACGAT GGCCGTTTCG ACCTGTTACC CAATCAAGGG
GGCGGGCTGC TGGCCCGCCT GTCGCTACCG ATCAGGCGAT AA
 
Protein sequence
MPRTLLARTF LLLAMLVLLT TAAWLSLFRY IDAEPRARET AKLAASAVNL IRASLFAAAP 
EKRLGLFTEF STREGIRLLP AEPEDEIEAM PDSRFFRLLQ RELLSRLGDH TRVAASVDGI
PGFWVSFRLD DADEEEYWLV LPRDRTARSI ASHWLAWGLL AIVLAMAVAW LIASRISRPL
KAMAKSAETL GRGQIPDPLP EDGTEELSRL ATAFNTMAAD LQRHEKDRSE VLAGISHDLR
TPLTRLRLEA EMSVADDGAR QAVVTDIEQM EAVISQFMDY ARAESGEAPT LTDLSALLAS
LAERQAYIGR QIVTDIQALP EAMLRPKAVT RAINNLLDNA AKYGGGDITL KAATINGEIQ
IDVGDHGPGV PPDDIERLKR PFTRLEAART NATGTGLGLA IVERIARLHD GRFDLLPNQG
GGLLARLSLP IRR