Gene Daro_1954 details

Gene Information

• Locus tag: Daro_1954
• Symbol: hscA
• ID: 3567400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dechloromonas aromatica RCB
• Kingdom: Bacteria
• Replicon accession: NC_007298
• Strand: +
• Start bp: 2105259
• End bp: 2107148
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637680425
• Product: chaperone protein HscA
• Protein accession: YP_285170
• Protein GI: 71907583
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 0.296275
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.863
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTCTGT TTCAAATCGC CGAACCTGGC GAATCGGCGG CACCGCACGA GCACAAGCTC 
GCCATCGGCA TCGACCTGGG TACCACCAAC TCGCTGGTTG CCACCGTGCG CAGCGGCATC 
GCTGTCTGCC TGAATGACGA TCAAGGGCGT CCGCTGCTGC CTTCCGTCGT GCGCTACCAC 
GCCGACGGCA CGACCGAGGT TGGCTACGAT GCGCAGAAGA ATCAGGCGGT CGACCCGAAG 
AACACGATTG TTTCGGTCAA GCGCTTCATG GGGCGGGGCA CCAAGGATAT TGCTCATGTT 
GAGTCGATGC CTTACGACTT CGTCGAGTCG CCGGGCATGG TCAAGCTAAA AACCCACGCC 
GGCATCAAGA GTCCGGTCGA GGTTTCGGCA GAAATCCTGA AATCCCTGAA GGCGAGGGCC 
GAGGCGGCTC TCGGTGGCGA CCTGGTTGGG GCGGTGATCA CCGTGCCAGC CTATTTTGAC 
GATGCCCAGC GGCAGGCGAC CAAGGATGCT GCCCGCCTGG CCGGCCTCAA TGTGCTGCGT 
CTGCTCAACG AGCCGACCGC TGCTGCCATC GCCTATGGGC TGGACAACGG TGCGGAGGGC 
GTCTACGCGG TCTACGACCT CGGTGGCGGC ACCTTCGATA TCTCCATTCT CAAGCTGACC 
AAGGGCGTTT TCGAGGTCAT GTCCACCGGC GGCGATTCGG CCCTGGGCGG CGACGACTTC 
GATCACCGCA TCTACTGCTG GGTCATTGAG CAGGCCGAAT TGCAACTGCT CTCGCCGGAA 
GACGCGCGGC GCCTGATGAT GCGCTGCCGC GAGGCCAAGG AGTTCCTGAC CAACAATCCG 
GAGGCGCCAA TCTCGCTGCG CCTGGCCTCC GGTGAGAACG TCGAGGTCAA ACTTGACGTT 
GCCACTTTTG CCCAGATTAC CCAGACCCTG ATTTCCAAGA CCCTGCAGCC GGTCAAGAAA 
GCACTACGCG ATGCTGGCCT GCGCGCCGAA GACATCAAGG GGGTGGTCAT GGTTGGCGGC 
GCAACGCGCA TGCCGCAGGT GCAGAAGGCA GTCGGTGATT TCTTCCGCCA GGAACCGCTG 
ACCAATCTCG ACCCGGACAA AGTCGTCGCC CTCGGTGCTG CGACGCAGGC CAACCTGCTG 
GCCGGCAACA AGACCGGTCG TGACGATTGG CTGCTGCTCG ACGTCATTCC GCTGTCGCTC 
GGCCTGGAAA CCATGGGCGG CCTGACTGAA AAGGTCATCC CGCGCAATTC GACCATCCCG 
ACGGCTCGCG CTCAGGAATT CACCACCTTC AAGGACGGCC AGACGGCGAT GGTCATCCAT 
GTCGTGCAGG GCGAGCGCGA AATGATCTCC GACTGCCGTT CTCTGGCCCG TTTCGAACTG 
CGCGGTATTC CGCCGATGGT GGCCGGCGCA GCGCGTATTC GAGTCACTTT CCAGGTTGAT 
GCCGACGGCC TGCTGTCGGT GACGGCCCGC GAACAGACGA CCGGCGTTGA ATCCAGCATT 
ACCGTCAAGC CGTCTTATGG CCTGTCGGAT GACGAGATCG CCGGCATGCT CAAGGATTCG 
ATGGAGCACG CCAAGGACGA CGCCATGACC CGCGCGCTGA AGGAAGCGCA GGTCGAGGCA 
CAACGCATGA TCGAGGCAAC CGAGGCGGCG CTGGCTGAAG ACCCGCATCT GCTCAACGAG 
GCGGAAACGG CCAAGATCAA GGCCACGATC GCCAAGCTGG CCGAAACCAT GGCTGGCGAA 
AATCGTCGCC TGATCAATAT CGCGATGGAT GACCTCGGTT TCGAAACCCA GGCCTTTGCC 
CATCGCCGCA TGGATCAGAG CATCAAAAAA GTGCTGTCCG GCCGCAACGT TGCCGACATC 
AAGGTTGGAG AAGAAGGAGA AAAGGCATGA 

 

Protein sequence

MALFQIAEPG ESAAPHEHKL AIGIDLGTTN SLVATVRSGI AVCLNDDQGR PLLPSVVRYH 
ADGTTEVGYD AQKNQAVDPK NTIVSVKRFM GRGTKDIAHV ESMPYDFVES PGMVKLKTHA 
GIKSPVEVSA EILKSLKARA EAALGGDLVG AVITVPAYFD DAQRQATKDA ARLAGLNVLR 
LLNEPTAAAI AYGLDNGAEG VYAVYDLGGG TFDISILKLT KGVFEVMSTG GDSALGGDDF 
DHRIYCWVIE QAELQLLSPE DARRLMMRCR EAKEFLTNNP EAPISLRLAS GENVEVKLDV 
ATFAQITQTL ISKTLQPVKK ALRDAGLRAE DIKGVVMVGG ATRMPQVQKA VGDFFRQEPL 
TNLDPDKVVA LGAATQANLL AGNKTGRDDW LLLDVIPLSL GLETMGGLTE KVIPRNSTIP 
TARAQEFTTF KDGQTAMVIH VVQGEREMIS DCRSLARFEL RGIPPMVAGA ARIRVTFQVD 
ADGLLSVTAR EQTTGVESSI TVKPSYGLSD DEIAGMLKDS MEHAKDDAMT RALKEAQVEA 
QRMIEATEAA LAEDPHLLNE AETAKIKATI AKLAETMAGE NRRLINIAMD DLGFETQAFA 
HRRMDQSIKK VLSGRNVADI KVGEEGEKA