Gene Daro_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1953 
SymbolhscB 
ID3567399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2104728 
End bp2105255 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content57% 
IMG OID637680424 
Productco-chaperone HscB 
Protein accessionYP_285169 
Protein GI71907582 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.00597172 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.35074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC GAGCCGATCA CTTCTCGCTG TTTGGGTTGA ACCGTGGTTT TCGGCTCGAT 
CTTTCTGACC TGGATTCTCG CTACCGAGAT ATCCAGGCTC AGGTTCATCC GGACCGCTTC
GCCAATGCAA GTGACGCGGA ACGCCGGATG TCTATGCAGT GGGCGACCCA TGCCAACGAG
GCCTACCAGA CGCTGAAAAA GCCGCTGGAG CGCGCCAAGT ACCTCCTGCA TCTGGCCGGC
CATGACATCA AGGCGGAGAG TAATACCTCG ATGCCGGCCG ATTTCCTGAT GGAACAGATG
GAATGGCGCG AAGCGGTGAT GGATGCACGT AATGGCGGCG ATCATCACGA ACTCGAGCAT
CTGCACAACC GCCTGAGCGG TGATGTCAAG AATCGCTATG AAGAGCTGGC GCAGTTGCTC
GATGATGCCG GCGACCACGC TCAGGCGACT GATCGCGTAC GTCGCCTGAT GTTCCTGGAA
AAACTCCTGT ACGAAATCGA CGACGCGCTG GCGTCGCTGG AAGAATAA
 
Protein sequence
MDLRADHFSL FGLNRGFRLD LSDLDSRYRD IQAQVHPDRF ANASDAERRM SMQWATHANE 
AYQTLKKPLE RAKYLLHLAG HDIKAESNTS MPADFLMEQM EWREAVMDAR NGGDHHELEH
LHNRLSGDVK NRYEELAQLL DDAGDHAQAT DRVRRLMFLE KLLYEIDDAL ASLEE