| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1933 |
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| Symbol | |
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| ID | 3567862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2078466 |
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| End bp | 2080352 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637680404 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_285149 |
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| Protein GI | 71907562 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.0320935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.229226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACG CAGTCCGCAA CAACAAAAGA ATCGTCCAGG TTTTTCTTGC GCTAATCACG
CTGCCTTTTG CGTTTTTTGG CGTTGATTCC TATATGCGCA GTGCTGGATC CGGTGGGGAC
GTCGCCTCCA TTGGTGATAT CAAGATCACC CAGCAGCAGT TCCAGCAAAC CTTGCGTGAG
CAGCAGGAAC GCCTGCGCAC CCAGCTGGGC GCCCAGTTCG ATGCCAAGAT GCTGGATAAT
CCAGAGGCGC GCCGGGCCAT TCTTGATGAC CTGATCAACC AGCGCCTGCT GTTGGTCGAG
GCCAGCAAGA AGCATATGAG CGTCAGCAAC GATGCGATAC GCCAGACGAT CGGTGCAATC
GAAGCCTTCA AGGTTGATGG CAAGTTCTCG ACCGAACGTT ATGAAGCTGC CTTGCGTGCT
CAAGGCATGT CGCCCACTGG TTTCGAAGCG CAGCTGCGTC AGGATCTGAC CCTGCAACAG
CTGGCATCGG CGGTCGGACA ATCCGGTCTG GTTGCCCGTT CTGTCAGCGA CCGACTGCTG
TCCCTGCAGA CCGAGAAGCG CGAAGTGATG GAATACCGCT TCAGCCTTGA GAGCTACCTC
GACAAAGTTA AACTGGCCGA CGATGCCGTC AGGAAGTTCT ATGACGAGAA TGGCCAGCAA
TTCCAGATGC CGGAGCAGGC CAAGGCTGAA TATGTCGTGC TGTCGATGGA TTCGATTGGC
TCTCAGCTGT CGGTGAGCGA TGCTGAAATC AAGGCCTGGT ACGACGGCCA TAAGGATCGT
TTCCAGGCGG CCGAGGAACG CCGGGCCAGC CACATCCTGC TGGCTTCCGA AAAGCTCGGA
AAAGACAAGG CAAAAGCCAA GGCCGAAGAA CTGCTGGCTG AAATTCGCAA GAACCCGGCT
GCCTTTGCCG ATCTGGCCAA GAAGAACTCC GATGATCCGG GTTCAGCGTC CAAGGGTGGC
GATCTGGGCT TCTTCGGTCG CGGCATGATG GTGAAGTCTT TTGAAGATAC GGCCTTCGGC
TTGAAGGATG GTGAGATTTC GGGGGTTGTC GAATCCGATT TCGGTTTTCA CATCATCAAG
GTGACCGGCA TTCATGCCGC CAAGGAAAAG CCGCTGGCTG ACGTCAAGGG TGAAATCGAA
GCCGAGTTGA AGAAAACCGG TTCTTCCCGC AAATTCGCCG AAGCCGCCGA AGCATTCAGC
AACATGGTCT ATGAGCAATC GGACAGCCTG AAACCAGTCG CCGAGAAATT CAAGCTGACC
ATCAAGCAAT CCGACTGGTT GGGTCGTCAG GCCAATCCGG CCAACGGCGT ACTGGGCAAC
GAGAAGATCA TGGCCGCCCT GTTCTCCGAC GATTCGGTCA AGAACAAGCG CAACACCGAG
GCAGTGGAAA TTGCGCCCAA CACGCTGGTT GCCGCACGTC TGATCGATTA CAAGCCAACT
GCCTTGCAGC CGTTCGATGG CGTCAAGGCG GGCATTGAAA CCATGTTGAA GCGTAAGGAA
GCACAAGTGC TGGCCAGCAA AGATGGCGAG GCCCGTCTGG AAGCGCTGAA AAAGGGTGAG
GACAAGCTGA ATTGGGGGGC TGCCAAGTCC GTGTCGCGTC TGGATTCCCG TCTGATTCCG
CCGCCGGCCG CACAGTCGGT GTTCCGGATG GAAACCGGCA AGCTGCCGGC TTATACGGGA
GTTGAGTTGC CGGGAACCGG CTATGCCTTG TACAAACTGA GCAAGGTGGT TGCTGGCGAA
AATCTGGATG AAGCGAGCAA GAAGGGCATG CTGCAGCAAC TCGGTAATCT GGTGGCCAAG
GAAGAGGTGC AGCTCTATCT GGCCGCACTG CGCAGCCGCT ACAAGGTAGA AGTTAACCAG
GCGGCGTTGG AAGCCAAGGA GAAGTAA
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| Protein sequence | MFDAVRNNKR IVQVFLALIT LPFAFFGVDS YMRSAGSGGD VASIGDIKIT QQQFQQTLRE
QQERLRTQLG AQFDAKMLDN PEARRAILDD LINQRLLLVE ASKKHMSVSN DAIRQTIGAI
EAFKVDGKFS TERYEAALRA QGMSPTGFEA QLRQDLTLQQ LASAVGQSGL VARSVSDRLL
SLQTEKREVM EYRFSLESYL DKVKLADDAV RKFYDENGQQ FQMPEQAKAE YVVLSMDSIG
SQLSVSDAEI KAWYDGHKDR FQAAEERRAS HILLASEKLG KDKAKAKAEE LLAEIRKNPA
AFADLAKKNS DDPGSASKGG DLGFFGRGMM VKSFEDTAFG LKDGEISGVV ESDFGFHIIK
VTGIHAAKEK PLADVKGEIE AELKKTGSSR KFAEAAEAFS NMVYEQSDSL KPVAEKFKLT
IKQSDWLGRQ ANPANGVLGN EKIMAALFSD DSVKNKRNTE AVEIAPNTLV AARLIDYKPT
ALQPFDGVKA GIETMLKRKE AQVLASKDGE ARLEALKKGE DKLNWGAAKS VSRLDSRLIP
PPAAQSVFRM ETGKLPAYTG VELPGTGYAL YKLSKVVAGE NLDEASKKGM LQQLGNLVAK
EEVQLYLAAL RSRYKVEVNQ AALEAKEK
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