| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1928 |
|---|
| Symbol | |
|---|
| ID | 3569585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2074517 |
|---|
| End bp | 2075077 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637680399 |
|---|
| Product | Appr-1-p processing |
|---|
| Protein accession | YP_285144 |
|---|
| Protein GI | 71907557 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.000000000913427 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.60812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA CCACTCCACC AAGCTATATG AACGGGCGAG TCCGCCTCTA TGTCGGCGAC
CTGACCGATC AAGCGGTCGA CGCTATCGTC AATGCAGCCA ACAGAACCCT GCTCGGCGGC
GGCGGGGTTG ATGGTGCGAT TCATCGACGT GGCGGCCCAG CCATTCTCGA CGCCTGCCGC
GAACTTCGCC GCAGCCAGTG GCCAGATGGT TTGCCTACAG GTCAGGTCGC GCTTACCAAC
GGTGGAAAAC TCCCGGCGCC TTACGTCATC CACACCGTCG GACCCATCTA TGGACAACAC
AGGGGAAAAG AAGCTGAACT GCTTGCTGCC TGCTATCGCA ACGCCATTGA GCTGGCGGCA
CACCTTGAAC TGAAAAGCCT CGCCTTTCCT TCAATCTCAA CCGGCGCCTT TGGCTACCCA
CCCGACAAGG CTGCGCTGAT CGTTTCGCGT TCAATGCACA AGGTTCTCGA TGAAATCGCT
GCCATCGATG AAATCCGGCT GGTGTTTTTC AACGCGTCGC AGATGGAAAC CTTCATCGCT
CACCAGAATT TTCCGCGCTG A
|
|---|
| Protein sequence | MMKTTPPSYM NGRVRLYVGD LTDQAVDAIV NAANRTLLGG GGVDGAIHRR GGPAILDACR
ELRRSQWPDG LPTGQVALTN GGKLPAPYVI HTVGPIYGQH RGKEAELLAA CYRNAIELAA
HLELKSLAFP SISTGAFGYP PDKAALIVSR SMHKVLDEIA AIDEIRLVFF NASQMETFIA
HQNFPR
|
|---|
| |