Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1919 |
Symbol | |
ID | 3569576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2060463 |
End bp | 2063930 |
Gene Length | 3468 bp |
Protein Length | 1155 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637680390 |
Product | SMC protein, N-terminal |
Protein accession | YP_285135 |
Protein GI | 71907548 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCC TTAGCCTGCG CCTGAAGAAC CTCAATTCGC TGAAGGGCGA ATGGACCATC GACTTCACCA AAGCCCCCTT CACCGACAAC TGCCTGTTCG CCATCACCGG CCCGACTGGC GCCGGCAAAT CGACGCTGCT CGACGCCATC TGCCTCGCCC TTTACCACCA GACGCCGCGC CTGAAGACCA TCTCGGCCAC CGACAACGAC ATCATGACGC GGCACACCGC CGACTGTCTG GCTGAGGTGG AATTCGAGGT AAAGGGCGCC GTCTACCGTG CCTTCTGGAG CCAGCGCCGT GCCCGCGACA AGATCGACGG CGCGCTGCAG GCACCAAAAG TGGAATTAGC CGCCGGCGAC GGCACCATCC TCAGTACCCA AACCAACGAC AAGCTGAAGC GCATCGCCGA GATCACCGGC CTCGATTTCC CGCGTTTCAC CAAGTCCATG CTGCTCGCCC AAGGTGGCTT CGCAGCCTTT CTGAATGCCA GTGCCAACGA ACGGGCCGAA CTGCTCGAAG AACTGACCGG CACCGAGATT TACGGCGAGA TTTCGCGCAA GGTTTTTGAG CAGGCACGCG ACGCCAAAAG CCAGCTCGAG CAGTTAAAAG CCCGTGCCGA CGGCATGGAA CTGCTCTCCG AAGAGCAACG CGCCGCGATG CAAGCCGAAG TCACCCGCCT CGACACGCAA CTCACCGACA CCCAGCGCCG CCACCAGCAA ACCCAGAGCC AGCGCCAGTG GCGCCTCGAT CTGGCGCAGG GCGAGCAGGA AGTCAAAACC GCCGAAGCCA GGCAGCAGGA GGCCGATGCA GCGCTGACAG CAGCGGCACC AGACCTGAAG AAACTGGCCG ACAGCGAACC GGCCGAAGCC CTGAAGCCGC TGCACCAGCA ATGGCAACAG GCTAGCGCCG CCTGCCAGCA AACCGAAACC GAACTCAAGG CCCTGCACGC CGAGCGCGAA AAACTGCAGG CCCACCAACT CGCCCAGCAC CAAACCGCCA GCCAGTTAAG CGCCCAGGTC GCCGCACAAG CCCAGCAAGC CCTGCAACAA AGCCAGCGCG AAGCCAAACA GCTCGACGAT TTCTGCGCCA CCCACCCGCA ACGCGCCCAG CTTGGCGAAC GCCTCGGCGT CTGGCGCCAG CAGTTTGAAC AGCGGGTCAA GCTGAACCGC GACCTCGCCG CCCAGCAACA GGCCCAACAG AAGCTCGAAC AGGAAATCGC CGAAACCGCC CGCCAGAGCG CCACACAAGC CAGCGCTGTC GCCAGCGCCG AAAAGGCCAA AACCACCGCT GACGCCGCAC TGGAAAAAAC CCAGACCGAG CAGAACCTGC GCCTGGCCGG CCAGACCCTG GCCGAACTGC GCCAGCACTG GCAAGGCGAG CAAGCCGGCC TCAACCGCTG GCAGCAACTC GAAGCCCTCG CTCAGCGCCG CCGCGAACTG GCCGTGCTGC AAACAACTCA GGCCACGCAA GTGCAGCAGG GCGAACAAAA GATCGAGGCC CAGGAAAAGG CGCTGGTCGC CCTGCGCGAG CAGCACAAGG AACTCGCCGC CCAGGTTGCC GACAAGCAGA AACTGCTTGA GCAGGAACGC CGCATCCAGA GCCTGGAAAC GCATCGCCGC CAATTGCAGC CGGGCGAGGC CTGCCCGCTG TGCGGCGCGC ACGAGCACCC GGCGATTGCC GACTACGCCG CACTTGACGT TTCCGCCACT GAAACGGCGC TCAAGGAAAA ACAGGCCTTG CTCGAAGCAT TGGTCCAGAA AGGCCAGCAA GCCAAAACCG AGCAGGCGGC AACGCAGGCC ACGCAAAAGG AATGGCTGGC CCAGCAGGCC AAAACAACGC AGGAAATTGC CCGCGCCCAG GCCGAATGGA CCGAATTCCT CGCCGGCCTG AGCAGCGAAA CGCCGCTCGC AACCGATGCC TGGCAGGAAG CCCAAACCCT GGCCTCCGCC CGCAACGCCG CCGAACAGGC ACTCGCCAAA CTCGCCGACC GGCTGAAAGC AGCAGACCAA GGCGAACAAG CCCTGAATGC GGCCCGCAAG ACGGCCACCG AAGCCGCCCA GACCCTGCTC AACGCCAGCA ACCAACTCAA GTTGCTGCAG CAGACAGCGC AAACCACTCA GCTTCGTCAG ACAGAACTGG CCAAAGCAGC ACAAACACTG ACTCAAGAAC GGGCTGAACT CGACAGCAAA CTAGCCGCAA CGCTGACCGA TGCCGGCTAC GAGACGCCTG ACGAACCCAC CATCTGGCTG CAAGAGCGCG ATGGCGAATG GCTGCACTGG CAGCAAACGC AGAAACGCCG CCACGAACTG GCCGAAATCC TGATCAAACA GCAGGATCGT TTTGATGCCG CGCAGACGCA GGCCGCGCAG TGGCTGGAAC GCTGGAAAAC GCAGGCCGCA AAACGCCCGG TCGCTGAGCA GGAGCCAAGG CCTGACGAAG CCACCGACGA CCCGGCAGCA GCCCTCACCC GCAGCGCCGA AACCATTGCC GATCTGACCC AACAGCTCGC CGCCCAGCAA GGCCGCCAGA CGCAACTCGA AACCAACGTC ACGCAGCAGA AAAAGGCCGT GGACGAGGCA TCGACTGCCT GGCAAACCGC ACTCGCCGCC AGCCCCTTCG CCGACCTCGC CGCCTACGCT GCGGCGCTGC TGCCGACCGA TGAACGCCAG CGCCTGCAGC AATTGAAAGA AGCCCGGCAA CTCGCCAAAC AGCAAGCCGA AGCGGTGCTC AAAGCCGCCG GCGAAAAGCT GCTCCGCCTG CAAACCACGC CACCGCCGCA AGACTCCGCC GAGTCCCCCA TTCCACCGCT GGCCGAACTG GAAGCAGCCC TAGCCCAACT CGAAACCAGC CGCCGCGAAC TCAGCGAACA ACTCGGTGCT CAGCGCGCCC TGCTCACCCG CGATGAACAA GCCCGGCAAA GCCAGCAGGC GCTGTTCAAG GATATCGCCG CGCAAACCGC CGAAAGCGAC CTCTGGCAGC GCCTCGACAG CCTGATTGGT TCAGCGCGGG GCGACAAGTT CCGCAAGTTC GCCCAAGGCC TGACCCTCGA CCACCTGCTG CACCTCGCCA ACAGCCACCT CGCCCGCCTG CACGGCCGCT ACCTGCTGCG CCGCAAAACC ACCGGCGAAC TCGAGCTCGA CATCGTCGAC AGCTGGCAAG GCGAAGTCGC CCGCGACACC CGCACCCTCT CCGGCGGCGA AAGCTTCCTG GTCAGCCTGG CGCTCGCATT GGCCCTCTCC GACCTCGTCA GCCACAAGAC CAGCATCGAT TCGCTCTTCC TCGACGAAGG CTTCGGCACC CTCGACGCCG ACACCCTGGA AATCGCCCTG AACGCCCTCG ACACCCTGAA CGCCAGCGGC AAGATGATCG GTGTGATCAG CCACGTCGAA GGCATGAAGG AGCGGATTCC GGCGCAGATT CGCGTGGAAA AAGGTGGCGG GGTTGGGTAT TCGCGGTTGA GGATTTAA
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Protein sequence | MKILSLRLKN LNSLKGEWTI DFTKAPFTDN CLFAITGPTG AGKSTLLDAI CLALYHQTPR LKTISATDND IMTRHTADCL AEVEFEVKGA VYRAFWSQRR ARDKIDGALQ APKVELAAGD GTILSTQTND KLKRIAEITG LDFPRFTKSM LLAQGGFAAF LNASANERAE LLEELTGTEI YGEISRKVFE QARDAKSQLE QLKARADGME LLSEEQRAAM QAEVTRLDTQ LTDTQRRHQQ TQSQRQWRLD LAQGEQEVKT AEARQQEADA ALTAAAPDLK KLADSEPAEA LKPLHQQWQQ ASAACQQTET ELKALHAERE KLQAHQLAQH QTASQLSAQV AAQAQQALQQ SQREAKQLDD FCATHPQRAQ LGERLGVWRQ QFEQRVKLNR DLAAQQQAQQ KLEQEIAETA RQSATQASAV ASAEKAKTTA DAALEKTQTE QNLRLAGQTL AELRQHWQGE QAGLNRWQQL EALAQRRREL AVLQTTQATQ VQQGEQKIEA QEKALVALRE QHKELAAQVA DKQKLLEQER RIQSLETHRR QLQPGEACPL CGAHEHPAIA DYAALDVSAT ETALKEKQAL LEALVQKGQQ AKTEQAATQA TQKEWLAQQA KTTQEIARAQ AEWTEFLAGL SSETPLATDA WQEAQTLASA RNAAEQALAK LADRLKAADQ GEQALNAARK TATEAAQTLL NASNQLKLLQ QTAQTTQLRQ TELAKAAQTL TQERAELDSK LAATLTDAGY ETPDEPTIWL QERDGEWLHW QQTQKRRHEL AEILIKQQDR FDAAQTQAAQ WLERWKTQAA KRPVAEQEPR PDEATDDPAA ALTRSAETIA DLTQQLAAQQ GRQTQLETNV TQQKKAVDEA STAWQTALAA SPFADLAAYA AALLPTDERQ RLQQLKEARQ LAKQQAEAVL KAAGEKLLRL QTTPPPQDSA ESPIPPLAEL EAALAQLETS RRELSEQLGA QRALLTRDEQ ARQSQQALFK DIAAQTAESD LWQRLDSLIG SARGDKFRKF AQGLTLDHLL HLANSHLARL HGRYLLRRKT TGELELDIVD SWQGEVARDT RTLSGGESFL VSLALALALS DLVSHKTSID SLFLDEGFGT LDADTLEIAL NALDTLNASG KMIGVISHVE GMKERIPAQI RVEKGGGVGY SRLRI
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