| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1914 |
|---|
| Symbol | |
|---|
| ID | 3569571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2056737 |
|---|
| End bp | 2057543 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637680385 |
|---|
| Product | Alpha/beta hydrolase fold |
|---|
| Protein accession | YP_285130 |
|---|
| Protein GI | 71907543 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTGT CCACAAAACC CCCTGTAATT CACCACCACC CAGCCCATCA CCCAAGCACC
AAGCCGCCGT TGCTTTTCGT CCATGGTGGT TACAGCAACG CCGCGCTGTG GGGCGTTCGC
TTCATTCCGT ATTTCCAGGA TCAGGGTTAC GACTGCTACG CGCTTGAGCT TTCCGGGCAC
GGCAGCCGAC CGGCGGATCG GGTGCATCTG GACGATTTCG GCCTCGACGA TTTCGTCGCA
GACCTGGCGG CTGCCGTGGC CAGTCTGCTC GCATTGCCGG TGCTGATTGC CCATTCGATG
GGCTGTCTGG TTTGCCAACG ATTTCTCGAA CGGGGCACGG CGCGGGCCGT GGCTTTCCTG
GCGCCGGTGC CGCCGACCGG AACGGGGGGC ACGGTCAGCC GCTTCGCGAT GACCATGCCG
GATTTCTTTG CCGAGTTGCC GAATGCGGTC AACGGCACGG CCAGCGAAAA AACCATGCGC
ACGATGGCCA GTGTCTATTT TTCGCCAAGC ATGGCGCCGG AAGAAACCGT CCAGTATCTG
CCGCTGATCC AGCCGGAATC GGAAAAGGCA GTGGCCGAAA TGCTGACTGC GCCCTTGCGC
ATCGCCCGTG GCCGGGCGCG CATTCCAGCG CTGGTCATGG GCGGTTCGGC CGACCAGGTC
TTCCCGGCCT CAATGCTTCA CTTCACGGCT GCCTCGTGGA ATGCCAAAAC GCAGGTCATT
GCGGGGGCCG GCCACATGCT GATGCTCGAC CCGCAATGGC CGGACGCCGC CGTCCAGCTT
GAGGAATGGC TGGATAGCCT GAACTGA
|
|---|
| Protein sequence | MQVSTKPPVI HHHPAHHPST KPPLLFVHGG YSNAALWGVR FIPYFQDQGY DCYALELSGH
GSRPADRVHL DDFGLDDFVA DLAAAVASLL ALPVLIAHSM GCLVCQRFLE RGTARAVAFL
APVPPTGTGG TVSRFAMTMP DFFAELPNAV NGTASEKTMR TMASVYFSPS MAPEETVQYL
PLIQPESEKA VAEMLTAPLR IARGRARIPA LVMGGSADQV FPASMLHFTA ASWNAKTQVI
AGAGHMLMLD PQWPDAAVQL EEWLDSLN
|
|---|
| |