| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1900 |
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| Symbol | |
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| ID | 3568822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2042669 |
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| End bp | 2044138 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637680371 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_285116 |
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| Protein GI | 71907529 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA AACCCCTGAA AATGACAGTT GCCGCCATTG CTGTCGCTGC TGCGCTGGGC
GGCGCCTATT CGCTGGGTCA ATACGCGCCC TTTGCCAGTG CCAACGCGAC AACCCAGCCT
GCCGCTAGCA GCGTCGCCCC TGCCGCCGCT CCGGTCAGCA CGCCTAACGG CCTGCCGGAC
ATGCGCAGCA TTGTCGCCAA CAATGCCCAG GCCGTGGTCA ACATCAGCGT GACCGGAACG
CGCAAGACGG GCGCCAACCT TCCCGGCATG CCGCAACTCG ACCCCGATGA CCCGCTTTAC
CAGTTCTTCC GCCGCTTCGG TGGACAGATG CCGCAGGACA ATGAACCCAC GCACGGCCTT
GGCTCCGGTT TCATCGTGAC GCCTGACGGC ACGGTGTTGA CCAATGCCCA TGTCGTCGAC
GGCGCCGAGG AAGTGACCGT CAAGCTTAAC GACAAGCGCG AATTCAAGGC CAAGGTGCTT
GGCCTGGACA AGGCAAGCGA TGTGGCCGTC CTGAGAATCG ACGCCAAAAA CCTGCCTACG
GTGAAGATCG GTTCATCGAC GCAGACTGCC GTCGGCGAAT GGGTGCTGGC CATCGGCTCG
CCGTTCGGAT TCGAAAGCAG CGCCAGTGCC GGCATTGTCT CGGCCAAGTC GCGCAACCTG
CCGGATGGCA GCTACGTGCC CTTCATCCAG ACCGATGTGG CAGTGAATCC CGGCAACTCC
GGCGGTCCGC TGTTCAACAT GAACGGCGAG GTAATCGGCA TCAATTCGCA GATCTACTCA
CGCAGCGGCG GTTACCAGGG GCTGTCTTTT GCCATTCCGA TCGAGGTCGC GATGAATGTC
GAAAAGCAGA TCGTCACGCA CGGCAAGGTG CAACGCGGCA AGCTCGGCGT CACCATCCAG
GAGGTCAACC AGTCGCTGGC AGACAGCTTC GGCCTGCCCA AACCGGCCGG CGCGCTGGTC
GCTGCAGTCG AGAAAGGCAG CCCGGCGGCC AAGGCGGGTC TGGAGCCTGG CGATGTCATT
CTCGGCATCG ACGGCAAAAC CGTCGAGACG CCCGGCGAAC TCCCTGCCGC CATCGCCACC
AAGCTGCCCG GCGAATCGGC CCGCCTGCAA ATCTGGCGCA AGGGTGGAAC GCAGAACATT
GATGTCAAGG TTGGCAGTTT CGGAGACGAG AAAGTGGCCG CGAACGACAC ACAGCCCGCC
ACCAAAGGTC GCCTCGGCGT CGCCGTGCGC CCACTGACGC CGGAAGAACG ACGCCAGGCC
GAGATCAAGG GTGGCGTGCT CGTCGAGCAA GCCGACGGCG CCGCCGGTCG TGCCGGCATC
CGGCCGGGCG ACATCATTGT GTCGGTCAAC GGACAGCCGA TTGGCGACGT CGAACAACTG
CGCAGCCTGA TCGCCAAATC CGGTAAGAAG GCAGCCATCC TGATCGAACG CGGCGATTCT
CGACTATTCG TTCCGGTCGA CCTCGGTTAA
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| Protein sequence | MKLKPLKMTV AAIAVAAALG GAYSLGQYAP FASANATTQP AASSVAPAAA PVSTPNGLPD
MRSIVANNAQ AVVNISVTGT RKTGANLPGM PQLDPDDPLY QFFRRFGGQM PQDNEPTHGL
GSGFIVTPDG TVLTNAHVVD GAEEVTVKLN DKREFKAKVL GLDKASDVAV LRIDAKNLPT
VKIGSSTQTA VGEWVLAIGS PFGFESSASA GIVSAKSRNL PDGSYVPFIQ TDVAVNPGNS
GGPLFNMNGE VIGINSQIYS RSGGYQGLSF AIPIEVAMNV EKQIVTHGKV QRGKLGVTIQ
EVNQSLADSF GLPKPAGALV AAVEKGSPAA KAGLEPGDVI LGIDGKTVET PGELPAAIAT
KLPGESARLQ IWRKGGTQNI DVKVGSFGDE KVAANDTQPA TKGRLGVAVR PLTPEERRQA
EIKGGVLVEQ ADGAAGRAGI RPGDIIVSVN GQPIGDVEQL RSLIAKSGKK AAILIERGDS
RLFVPVDLG
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