Gene Daro_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1889 
Symbol 
ID3569604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2029754 
End bp2030152 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID637680360 
Productmethionine sulfoxide reductase B 
Protein accessionYP_285105 
Protein GI71907518 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAA TCGAAAAGAC CGACGCCGAA TGGCGTGCCC AGCTCGATGA AAACGAATAC 
CGCGTCACCC GCCAGAAAGG CACCGAACGC GCCTTCACCG GTAAATACTG GGATACCCAC
GATGACGGCA CCTACCGCTG CATCTGCTGT GGCGCCCCAC TCTTTCGCTC AGAAACCAAG
TTCGATTCCG GTTGCGGCTG GCCGAGCTTT CACACGCCTA ACGATGAAAA GCTGATCGAC
GAGCACGTCG ATCAGAGCTT CGGCATGATC CGCACCGAAG TCACCTGTCA CGACTGCGGC
GCCCACCTCG GTCACGTCTT CGACGACGGC CCGGCGCCAA CCGGGCTGCG CTACTGCATC
AACTCGGCGT CGCTGAAGCT GGAGAAGGAT GGGAAATGA
 
Protein sequence
MPKIEKTDAE WRAQLDENEY RVTRQKGTER AFTGKYWDTH DDGTYRCICC GAPLFRSETK 
FDSGCGWPSF HTPNDEKLID EHVDQSFGMI RTEVTCHDCG AHLGHVFDDG PAPTGLRYCI
NSASLKLEKD GK